PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027361241.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family LBD
Protein Properties Length: 163aa    MW: 17823.6 Da    PI: 9.2538
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027361241.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26095.55.5e-302104198
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+ lr++C++dCvl+ ++     p++q++++ +v+++FG+++++++l+++p+++r+ +++sl+yeA  ra +Pv+Gavg++++++++l+ql
  XP_027361241.1   2 SCNGCRALRKGCSEDCVLRHCLqwienPQAQAHATLFVARFFGRATLISFLSSVPTNQRSGMFRSLLYEAVGRAVNPVNGAVGLLWSGKWNLCQL 96 
                     6********************************************************************************************** PP

          DUF260  91 kaelallk 98 
                      +e +l++
  XP_027361241.1  97 GVENVLRG 104
                     99987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MSCNGCRALR KGCSEDCVLR HCLQWIENPQ AQAHATLFVA RFFGRATLIS FLSSVPTNQR  60
SGMFRSLLYE AVGRAVNPVN GAVGLLWSGK WNLCQLGVEN VLRGAALTPL PHHSSRKLFP  120
HVNVAQPHTL LGSCQPLMNS EMTTLPSTTG DTASQTKLLT LFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.12e-58LBD family protein