PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361305.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Protein Properties

Length: 436aa MW: 49556.1 Da PI: 9.3724

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361305.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.6	1.1e-18	9	96	5	98
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 l+ + +l+s++l++p +f++++gg+ s+ tl+ ++g++W++ l +k ++r+++ +GW+eFv+ + g f+vF+++g+s+f v++f+ XP_027361305.1 9 LILPTTLQSRQLRIPDNFLRKYGGQ--LSTIATLTVPDGNVWRIGL--KKADNRIWFVDGWQEFVQRYSIGIGYFLVFMYEGNSSF--IVHIFN 96 55567778889*********999..8999***********..***********************************9..999986 PP
2	B3	56.2	6.4e-18	303	394	4	99
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 vl ps+ + ++++lp fae++ +g++ ++l+ ++gr+W v++ yr+++ l++GW eF +n+L egD++vF+l + +e l v+vf XP_027361305.1 303 VLRPSYLYRGCIMYLPSCFAEKNlNGVSG---FIKLQISNGRQWPVRCLYRGGR--AKLSQGWFEFTLENNLGEGDVCVFELLRMKEVVLQVTVF 392 78899****************876743...59**********665555..66*********************99889999999999 PP -S CS B3 98 rk 99 r XP_027361305.1 393 RV 394 85 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MPRPSFHKLI LPTTLQSRQL RIPDNFLRKY GGQLSTIATL TVPDGNVWRI GLKKADNRIW 60 FVDGWQEFVQ RYSIGIGYFL VFMYEGNSSF IVHIFNLSTS EVNYQSVMRN RNEGPCFANY 120 HHIFDEMEDV DSFDLSDSST PYLTSGALQN KVFAGPVNQM TPGKSHTPAL QNLFNGGSKL 180 NRVNWGDSGS VFPPKGANSQ DHPSTRDIGV QFNAIEFKRS TEELKLRFSN EEGVNKTATA 240 RKKRKVDPNG EEPSGENEDE VEMRYRFYES ASARKRTVTA EERERAINAA KAFEPPNPFC 300 RVVLRPSYLY RGCIMYLPSC FAEKNLNGVS GFIKLQISNG RQWPVRCLYR GGRAKLSQGW 360 FEFTLENNLG EGDVCVFELL RMKEVVLQVT VFRVTEDAAG LMNPSPMQQQ GQNVSHTKLL 420 NPHLQHRVST TKLVRN

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MPRPSFHKLI LPTTLQSRQL RIPDNFLRKY GGQLSTIATL TVPDGNVWRI GLKKADNRIW  60
FVDGWQEFVQ RYSIGIGYFL VFMYEGNSSF IVHIFNLSTS EVNYQSVMRN RNEGPCFANY  120
HHIFDEMEDV DSFDLSDSST PYLTSGALQN KVFAGPVNQM TPGKSHTPAL QNLFNGGSKL  180
NRVNWGDSGS VFPPKGANSQ DHPSTRDIGV QFNAIEFKRS TEELKLRFSN EEGVNKTATA  240
RKKRKVDPNG EEPSGENEDE VEMRYRFYES ASARKRTVTA EERERAINAA KAFEPPNPFC  300
RVVLRPSYLY RGCIMYLPSC FAEKNLNGVS GFIKLQISNG RQWPVRCLYR GGRAKLSQGW  360
FEFTLENNLG EGDVCVFELL RMKEVVLQVT VFRVTEDAAG LMNPSPMQQQ GQNVSHTKLL  420
NPHLQHRVST TKLVRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-132	B3 family protein