PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027361562.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 725aa    MW: 79872.2 Da    PI: 6.3176
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027361562.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.33.7e-2061116156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     ++  +++t+ q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  XP_027361562.1  61 KKGYHRHTQRQIQEMEAFFQQCPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 116
                     5778899**********************************************998 PP
2START212.81.3e-662474661206
                     HHHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     ela +a++el ++a++++p+Wv      e++n+de+l++f+++ +      ++ea+r+s+vv+m++++lv +l+d++ qW++ +     +a tle
  XP_027361562.1 247 ELAVAAMEELTRLAQVGDPLWVPNNhrtEILNEDEYLRSFPRGIGpkhvgLRSEASRESTVVIMNHMNLVDILMDVN-QWSTVFCgivsRALTLE 340
                     57899*****************99999***************999********************************.******99999****** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                     v+s+g      galq+m+ae+q++splvp R+ +fvRy++q+++g w++vdvS+d+ ++ +    + R++++pSg+li++++ng+skvtw+ehv+
  XP_027361562.1 341 VLSTGvagnynGALQVMSAEFQVPSPLVPtRENYFVRYCKQHPDGIWAVVDVSLDNLRPTT----ISRSRRRPSGCLIQELPNGYSKVTWIEHVE 431
                     ***********************************************************88....79**************************** PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++r +h+++++lv+sgla+gak+wvatl+rqce+
  XP_027361562.1 432 VDDRAVHNIYKPLVNSGLAFGAKRWVATLDRQCER 466
                     *********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 725 aa     Download sequence    
MFHTNMFDSH QHMLDMSSTH KTFCESDLGK ARDDEYESKS GTETMDAHSS DDQEPNQRPN  60
KKGYHRHTQR QIQEMEAFFQ QCPHPDDKQR KELSRELGLE PLQVKFWFQN KRTQMKAQHE  120
RHENTILKAE NEKLRAENNR YKEALTNATC PNCGGPATLG EMSFDEQHLR IENARLREEI  180
DRISGIATKY VGKPVTSYSN LSSHNNNHVP VGNYGAQSGM VGEMYGGSDL LRSLPAPADA  240
DKPMIVELAV AAMEELTRLA QVGDPLWVPN NHRTEILNED EYLRSFPRGI GPKHVGLRSE  300
ASRESTVVIM NHMNLVDILM DVNQWSTVFC GIVSRALTLE VLSTGVAGNY NGALQVMSAE  360
FQVPSPLVPT RENYFVRYCK QHPDGIWAVV DVSLDNLRPT TISRSRRRPS GCLIQELPNG  420
YSKVTWIEHV EVDDRAVHNI YKPLVNSGLA FGAKRWVATL DRQCERLASS MANYIPAGDL  480
CVITSPEGRK GMLKLAERMV ISYCSGVGAS TAHAWTTLSA TGCDDVRVMT RKSTDDPGRP  540
PGIVLCAATS FWLPVPPKRV FDFLRDENSR NEWDILSNGG LVQEMAHIAN GRDPGNSVSL  600
LRVNGTNSSQ SNMLILQESC TDSTGSYVVY APVDIVAMNV VLSGGDPDYV ALLPSGFAIL  660
PDGPGSNGGA VLDVGSGGSL LTVAFQILVD SAPTAKLSLG SVATVNSLIK CTVERIKVAV  720
IRDGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21750.20.0HD-ZIP family protein