PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361605.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 521aa MW: 58855.6 Da PI: 7.6965

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361605.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.3	2.1e-19	45	89	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rWT+eEd ll++ vk++ g++Wk+Ia++++ gRt+ qc +rwqk+l XP_027361605.1 45 RWTEEEDNLLIETVKKHHGRSWKKIAAYLP-GRTDVQCLHRWQKVL 89 9***************************.**********986 PP
2	Myb_DNA-binding	62.2	1e-19	95	141	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ lv++v+++G ++W+ Ia++++ gR +kqc++rw+++l XP_027361605.1 95 KGSWTKEEDDCLVELVRKHGVKRWSVIAKYLP-GRIGKQCRERWHNHL 141 799***************************.***********97 PP
3	Myb_DNA-binding	51.1	3e-16	147	189	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE++ l+ +++ +G++ W+ Iar ++ gRt++ +k++w+ XP_027361605.1 147 KDAWTEEEELTLAYYHQIYGSK-WAEIARILP-GRTDNAIKNHWN 189 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence
MLEVKKELKD FNADSPHLSS SKCNSDTSLP ESTPVTGKIK AQARRWTEEE DNLLIETVKK 60 HHGRSWKKIA AYLPGRTDVQ CLHRWQKVLN PDLVKGSWTK EEDDCLVELV RKHGVKRWSV 120 IAKYLPGRIG KQCRERWHNH LDPAIKKDAW TEEEELTLAY YHQIYGSKWA EIARILPGRT 180 DNAIKNHWNC SMKKKLDASP LRCDINVATS SFCASRIKPT PKVEDQSFNR IVSLDQSHWS 240 KHSVDYFSTK LILQNAAREE CCYENGCFEG ITPIASRQGG ESRLDNLPNE ILTGTCYEDH 300 VNAANPTCII KNMDSFLENS LDMLATNLSC FPLASAVTYS AYKSPKRQKV SFSDAEFIVG 360 DESDSPRLSY SKTINREKKC QSVRRSYNEI NSMPHDSDGM RGEYAYFPAE LPPGEDLAPP 420 TEFSECLSPK TPMTYADNKS RCSTPPTTLL RSYIGDISPE TVLKSLAMTY KNVPSIIRKR 480 TPRKASCCDS DQAPSGMITC TPEAENVIGF DNLTLNQGFM P

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence

MLEVKKELKD FNADSPHLSS SKCNSDTSLP ESTPVTGKIK AQARRWTEEE DNLLIETVKK  60
HHGRSWKKIA AYLPGRTDVQ CLHRWQKVLN PDLVKGSWTK EEDDCLVELV RKHGVKRWSV  120
IAKYLPGRIG KQCRERWHNH LDPAIKKDAW TEEEELTLAY YHQIYGSKWA EIARILPGRT  180
DNAIKNHWNC SMKKKLDASP LRCDINVATS SFCASRIKPT PKVEDQSFNR IVSLDQSHWS  240
KHSVDYFSTK LILQNAAREE CCYENGCFEG ITPIASRQGG ESRLDNLPNE ILTGTCYEDH  300
VNAANPTCII KNMDSFLENS LDMLATNLSC FPLASAVTYS AYKSPKRQKV SFSDAEFIVG  360
DESDSPRLSY SKTINREKKC QSVRRSYNEI NSMPHDSDGM RGEYAYFPAE LPPGEDLAPP  420
TEFSECLSPK TPMTYADNKS RCSTPPTTLL RSYIGDISPE TVLKSLAMTY KNVPSIIRKR  480
TPRKASCCDS DQAPSGMITC TPEAENVIGF DNLTLNQGFM P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	6e-77	MYB family protein