PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361645.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C3H

Protein Properties

Length: 1282aa MW: 142225 Da PI: 6.0948

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361645.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	19.3	2e-06	1259	1282	2	26
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 +++ C+ f+++G+Ck G++C + H+ XP_027361645.1 1259 GQRVCK-FYESGYCKKGASCDYLHP 1282 6799.8899***********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1282 aa Download sequence
MEEPRQPQPE TAASVVRDLE ESRLVGVPVA LARDVDVAET EGACCVPNLE VTVVDGVVLK 60 RKRGRPARGV PKTAPPVKQQ KDEEDVCFIC FDGGSLVLCD RRGCPKAYHP ACIKRDEAFF 120 RSKAKWNCGW HICSACQKAA HYMCYTCTYS LCKGCTKDAD FVCVRENKGL CGVCMRTIML 180 IENSAQGNKE MCEVDFDDKS SWEYLFKVYW MYLKGKLSLT FDELLQAKNP WKSVAPMGCK 240 IQTPHELYHL KDDKGSGSEN SCIDIESNNS KNNKSKRPQK LLSKGDCFDR VTSGGDSGVS 300 LPECTKWASK ELLEFVAHMK NGDTSLLSQF DVQTLLLEYV KKNNLRDPQQ KSQIVCDSRL 360 LNLFGKARVG HIEMLELLES HFLLKDNGPV ENTFGAGIID AVASEGEAIN NYNKQLALVS 420 DKRCKTRRKD DVIVPQNNPD AYAAIDTHNI NLIYLRQALM ENLTEDIEKI HEKVVGSFVR 480 IRVSSSDQKQ DMHRLVQVVG TSKVAEPYKV GTKATDIKLE ILNLNRKEVI SIDEISNQEF 540 AEDECKRLRQ SIKYGLSKRL TVGEILDKAL ALQAIRVNDL LEAEILRLNH LRDRASEKGH 600 RKELKEYVEK LQLLNSPEER QRRLHEIPDV HSDPNLDSMF ESDEDDGESD ERKKDGNIWS 660 KYLGFDRRER GPVFPKIWNG VLNDVGCKTQ DLPAARQPMG NICVLKNHIN HDDTAIDDST 720 KAVPKSEVST VPVDISSSLL STGLEQPFND LRSDRSWHYQ DPTGKIQGPF SMLQLWNWNK 780 SGHFPPDLRI WKIDDKQDNS ILLTDAISGK CSKTVSLPFN SQLLSLGVSV TLDNKDNSQD 840 AGRNASKNEI SSDSQIIEQS REQKVDDTST QSNGKDESVR SNGWQDQLHV FPPLLSTAFP 900 ENLNEIPSDK LRKGHGIEGN SEDNGNNGSN RTSDGQSNSG QSYHKQSDSE DNSGQSSGQN 960 WRHTNVNSSS NCLVTTSTHV SGTKTSPHKL GFDLHNPPSP PACNTTTWQA IIGEPNDFDE 1020 SVSDLLAEVE AMESLGGLES PTSIMKCGEE LTEGSKNDCL NFAELSPMLD AGKGDALSST 1080 ADLNLPSQSS AAEEPLQQAD VHHHQRISGE HSSRSSKVEV GTKNVSVSGN QWESRSENSP 1140 IVPSSATLGL ATDTTWRLGS ENTHLGWGGI DQGNANMGWG VCQTAVQENR SSNSYNSVVT 1200 QAFGDSQTRY GSDRFSVPRD RGLQGHGRES GFGRGRIAYN RQSLFGVGNG GSYRPLPKGQ 1260 RVCKFYESGY CKKGASCDYL HP

Sequence ? help Back to Top

Protein Sequence Length: 1282 aa Download sequence

MEEPRQPQPE TAASVVRDLE ESRLVGVPVA LARDVDVAET EGACCVPNLE VTVVDGVVLK  60
RKRGRPARGV PKTAPPVKQQ KDEEDVCFIC FDGGSLVLCD RRGCPKAYHP ACIKRDEAFF  120
RSKAKWNCGW HICSACQKAA HYMCYTCTYS LCKGCTKDAD FVCVRENKGL CGVCMRTIML  180
IENSAQGNKE MCEVDFDDKS SWEYLFKVYW MYLKGKLSLT FDELLQAKNP WKSVAPMGCK  240
IQTPHELYHL KDDKGSGSEN SCIDIESNNS KNNKSKRPQK LLSKGDCFDR VTSGGDSGVS  300
LPECTKWASK ELLEFVAHMK NGDTSLLSQF DVQTLLLEYV KKNNLRDPQQ KSQIVCDSRL  360
LNLFGKARVG HIEMLELLES HFLLKDNGPV ENTFGAGIID AVASEGEAIN NYNKQLALVS  420
DKRCKTRRKD DVIVPQNNPD AYAAIDTHNI NLIYLRQALM ENLTEDIEKI HEKVVGSFVR  480
IRVSSSDQKQ DMHRLVQVVG TSKVAEPYKV GTKATDIKLE ILNLNRKEVI SIDEISNQEF  540
AEDECKRLRQ SIKYGLSKRL TVGEILDKAL ALQAIRVNDL LEAEILRLNH LRDRASEKGH  600
RKELKEYVEK LQLLNSPEER QRRLHEIPDV HSDPNLDSMF ESDEDDGESD ERKKDGNIWS  660
KYLGFDRRER GPVFPKIWNG VLNDVGCKTQ DLPAARQPMG NICVLKNHIN HDDTAIDDST  720
KAVPKSEVST VPVDISSSLL STGLEQPFND LRSDRSWHYQ DPTGKIQGPF SMLQLWNWNK  780
SGHFPPDLRI WKIDDKQDNS ILLTDAISGK CSKTVSLPFN SQLLSLGVSV TLDNKDNSQD  840
AGRNASKNEI SSDSQIIEQS REQKVDDTST QSNGKDESVR SNGWQDQLHV FPPLLSTAFP  900
ENLNEIPSDK LRKGHGIEGN SEDNGNNGSN RTSDGQSNSG QSYHKQSDSE DNSGQSSGQN  960
WRHTNVNSSS NCLVTTSTHV SGTKTSPHKL GFDLHNPPSP PACNTTTWQA IIGEPNDFDE  1020
SVSDLLAEVE AMESLGGLES PTSIMKCGEE LTEGSKNDCL NFAELSPMLD AGKGDALSST  1080
ADLNLPSQSS AAEEPLQQAD VHHHQRISGE HSSRSSKVEV GTKNVSVSGN QWESRSENSP  1140
IVPSSATLGL ATDTTWRLGS ENTHLGWGGI DQGNANMGWG VCQTAVQENR SSNSYNSVVT  1200
QAFGDSQTRY GSDRFSVPRD RGLQGHGRES GFGRGRIAYN RQSLFGVGNG GSYRPLPKGQ  1260
RVCKFYESGY CKKGASCDYL HP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51120.1	0.0	C3H family protein