PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027361719.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 228aa    MW: 26441.6 Da    PI: 9.7151
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027361719.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.64.5e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k ien +nrqvt+skRrngi+KKA+ELSvLCda+v++i+fs+++kl+ey+s
  XP_027361719.1  9 KLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKLHEYIS 59
                    569**********************************************86 PP
2K-box67.44.7e-2376172699
           K-box   6 gks.leeakaeslqqelakLkkeienLqreqRhllGedLes..LslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                     g   l+ +++e++ ++l+kLk+ + +L+r++Rh++Ge+L+s  Ls+++L++Le+++  s+ kiR++K +++++ +++ +kk ++l++ n +L  +
  XP_027361719.1  76 GDIdLWRSHYEKMLENLKKLKDINIKLRRQIRHRIGEGLDSddLSFQQLRNLEEDMVASIGKIRERKIHVIKTRTDTCKKKVRSLEQMNGNLLLE 170
                     43359**********************************7444***********************************************99877 PP

           K-box  98 le 99 
                     le
  XP_027361719.1 171 LE 172
                     65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MGRGKIEIKL IENPTNRQVT YSKRRNGIFK KAHELSVLCD AKVSLIMFSK NNKLHEYISP  60
GLTTKKIIDQ YQKTLGDIDL WRSHYEKMLE NLKKLKDINI KLRRQIRHRI GEGLDSDDLS  120
FQQLRNLEED MVASIGKIRE RKIHVIKTRT DTCKKKVRSL EQMNGNLLLE LEKCVIHPQF  180
LLHDEGDEES AVALANGASN LYAFCQHHTH LSLPHHGEPF KIDDLRLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.17e-64MIKC_MADS family protein