PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361782.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MIKC_MADS

Protein Properties

Length: 220aa MW: 25201.8 Da PI: 8.4357

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361782.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87.2	9.3e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +ri+n++ rqvtfskRr+g++KKA+EL +LCda+v v+ifsstgklyey+s XP_027361782.1 9 ERIDNSTSRQVTFSKRRKGLIKKAKELAILCDAQVGVVIFSSTGKLYEYAS 59 69***********************************************86 PP
2	K-box	79.2	1e-26	80	169	9	98
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++e + +q+e++ L+++++nLq+++R+l+Ge+L Ls+++Lq Le+qLe sl+ +R kK+++l+++i+el +k + + +en +L kk+ XP_027361782.1 80 NSEPGVKFWQREAEFLRQQLQNLQENHRQLMGEQLYGLSVRNLQDLENQLEMSLQGVRMKKEQILRDEIQELNRKGNLIYQENVELYKKV 169 5778899*******************************************************************************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MGRGKIVIER IDNSTSRQVT FSKRRKGLIK KAKELAILCD AQVGVVIFSS TGKLYEYAST 60 SMKSMIERYN TCKEEDQLTN SEPGVKFWQR EAEFLRQQLQ NLQENHRQLM GEQLYGLSVR 120 NLQDLENQLE MSLQGVRMKK EQILRDEIQE LNRKGNLIYQ ENVELYKKVY GTADMAATSR 180 NAFVPLPYAI HAGGHPQELI QLQLLQPEQE ACETSGSATK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	6e-86	MIKC_MADS family protein