PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027361886.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 755aa    MW: 82415.6 Da    PI: 6.8849
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027361886.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.21.8e-24153254199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae++      + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F   + ++
  XP_027361886.1 153 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyS-QQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGDD 244
                     99****************************963.3445679************************************************..3489 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+++++r+
  XP_027361886.1 245 GELRLGIRRA 254
                     999****996 PP
2Auxin_resp119.82.2e-39279360182
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                     +++a+st+++F+v+YnPr+s+s+F+++v++++k+l++++s+GmRf+m+feted+serr++G+++g+sd+dpvrWp+SkWr+L
  XP_027361886.1 279 VVNALSTRCAFSVCYNPRVSSSDFIIPVQRFLKSLDCSYSAGMRFRMRFETEDASERRFTGLIAGISDVDPVRWPGSKWRCL 360
                     6899*****************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 755 aa     Download sequence    
MGLIDLNTTE DDETPSSASS SSSSSSSHSG ISTSVSTVVV PSPPSVCLEL WHACAGPLIS  60
LPKKGSVVVY LPQGHFEQVQ DIPVTAYNIP PHVFCRVLDV KLHAEEGSDE VYCQVILVPE  120
SEQVEQSLRE GEIDADGEED TETIVKSTTP HMFCKTLTAS DTSTHGGFSV PRRAAEDCFP  180
PLDYSQQRPS QELVAKDLHG LEWRFRHIYR GQPRRHLLTT GWSAFVNKKK LVSGDAVLFL  240
RGDDGELRLG IRRAAQLKSA GSFGAPSGQQ LNPANLMDVV NALSTRCAFS VCYNPRVSSS  300
DFIIPVQRFL KSLDCSYSAG MRFRMRFETE DASERRFTGL IAGISDVDPV RWPGSKWRCL  360
LVRWDDIEAA RHNRVSPWEI EPSGSASTCS NLMAAGLKRT RIGLTSAKLE FPASNGIGTS  420
GFGESLRFRK VLQGQEILGV NTPFDCVNAQ SPRLYELGRC YPGSNSSGIP ATGNNVRMPH  480
VTSDFSCNGI GFSESLRFQK VLQGQEILPS QPYGRALSIE EAHGNGRFGL FDGYQLLSSR  540
NGWSAQVHDN ASHLHASVTT GQVSSPSSVL MFQQAVNPIS NCDYNKKRNQ ERYQGSYTPE  600
VKGRTFASSP PGDTIFPRRA QEGTNSFGML NVHNQLAGSR LHESVSALRS SQELVSSCKS  660
SCRLFGFSLT ENPHIANKEA DATSTITCPL NSGPSFTRLV EDEFHPGHSH RSKAVGSNCA  720
KVSDICILSL NMQEVVITSF TLIFDIFAGC IAVLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.10.0ARF family protein