PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361902.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 724aa MW: 79036.5 Da PI: 7.0704

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361902.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.3	1.7e-24	153	254	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + ++ XP_027361902.1 153 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyS-QQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGDD 244 99**************************963.3445679********************************************..3489 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +el+++++r+ XP_027361902.1 245 GELRLGIRRA 254 999**996 PP
2	Auxin_resp	110.3	2e-36	279	358	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +++a+st+++F+v+YnP+ +s+F+++v++++k+l++++s+GmRf+m+feted+serr++G+++g+sd+dpvrWp+SkWr+L XP_027361902.1 279 VVNALSTRCAFSVCYNPS--SSDFIIPVQRFLKSLDCSYSAGMRFRMRFETEDASERRFTGLIAGISDVDPVRWPGSKWRCL 358 6899***********8..5**********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 724 aa Download sequence
MGLIDLNTTE DDETPSSASS SSSSSSSHSG ISTSVSTVVV PSPPSVCLEL WHACAGPLIS 60 LPKKGSVVVY LPQGHFEQVQ DIPVTAYNIP PHVFCRVLDV KLHAEEGSDE VYCQVILVPE 120 SEQVEQSLRE GEIDADGEED TETIVKSTTP HMFCKTLTAS DTSTHGGFSV PRRAAEDCFP 180 PLDYSQQRPS QELVAKDLHG LEWRFRHIYR GQPRRHLLTT GWSAFVNKKK LVSGDAVLFL 240 RGDDGELRLG IRRAAQLKSA GSFGAPSGQQ LNPANLMDVV NALSTRCAFS VCYNPSSSDF 300 IIPVQRFLKS LDCSYSAGMR FRMRFETEDA SERRFTGLIA GISDVDPVRW PGSKWRCLLV 360 RWDDIEAARH NRVSPWEIEP SGSASTCSNL MAAGLKRTRI GLTSAKLEFP ASNGIGTSGF 420 GESLRFRKVL QGQEILGVNT PFDCVNAQSP RLYELGRCYP GSNSSGIPAT GNNVRMPHVT 480 SDFSCNGIGF SESLRFQKVL QGQEILPSQP YGRALSIEEA HGNGRFGLFD GYQLLSSRNG 540 WSAQVHDNAS HLHASVTTGQ VSSPSSVLMF QQAVNPISNC DYNKKRNQER YQGSYTPEVK 600 GRTFASSPPG DTIFPRRAQE GTNSFGMLNV HNQLAGSRLH ESVSALRSSQ ELVSSCKSSC 660 RLFGFSLTEN PHIANKEADA TSTITCPLNS GPSFTRLVED EFHPGHSHRS KAVGSNCAKG 720 VLQY

Sequence ? help Back to Top

Protein Sequence Length: 724 aa Download sequence

MGLIDLNTTE DDETPSSASS SSSSSSSHSG ISTSVSTVVV PSPPSVCLEL WHACAGPLIS  60
LPKKGSVVVY LPQGHFEQVQ DIPVTAYNIP PHVFCRVLDV KLHAEEGSDE VYCQVILVPE  120
SEQVEQSLRE GEIDADGEED TETIVKSTTP HMFCKTLTAS DTSTHGGFSV PRRAAEDCFP  180
PLDYSQQRPS QELVAKDLHG LEWRFRHIYR GQPRRHLLTT GWSAFVNKKK LVSGDAVLFL  240
RGDDGELRLG IRRAAQLKSA GSFGAPSGQQ LNPANLMDVV NALSTRCAFS VCYNPSSSDF  300
IIPVQRFLKS LDCSYSAGMR FRMRFETEDA SERRFTGLIA GISDVDPVRW PGSKWRCLLV  360
RWDDIEAARH NRVSPWEIEP SGSASTCSNL MAAGLKRTRI GLTSAKLEFP ASNGIGTSGF  420
GESLRFRKVL QGQEILGVNT PFDCVNAQSP RLYELGRCYP GSNSSGIPAT GNNVRMPHVT  480
SDFSCNGIGF SESLRFQKVL QGQEILPSQP YGRALSIEEA HGNGRFGLFD GYQLLSSRNG  540
WSAQVHDNAS HLHASVTTGQ VSSPSSVLMF QQAVNPISNC DYNKKRNQER YQGSYTPEVK  600
GRTFASSPPG DTIFPRRAQE GTNSFGMLNV HNQLAGSRLH ESVSALRSSQ ELVSSCKSSC  660
RLFGFSLTEN PHIANKEADA TSTITCPLNS GPSFTRLVED EFHPGHSHRS KAVGSNCAKG  720
VLQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	0.0	ARF family protein