PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361935.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 308aa MW: 36282.6 Da PI: 8.4888

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361935.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	85.4	6.8e-27	49	130	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++qe+++ i++r e e+++ ++k++ +lWe+vs+kmrergf+rsp+qCk+kw+nl +ryk ++++ ++ ++cp+f++l+ XP_027361935.1 49 QWSQQETREFIAIRAEFERDFTASKRNRTLWEAVSSKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEQ----GRQCPFFEELR 130 7************************************************************99999974....678****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MFGGGGDDAL AARLGMVSPS LLNPATSTVM SGEISPAPAR EERAPAQPQW SQQETREFIA 60 IRAEFERDFT ASKRNRTLWE AVSSKMRERG FRRSPEQCKC KWKNLVNRYK GKETSDPEQG 120 RQCPFFEELR AVFTERAHNL QRKQMLLESE TRSAQTKKGV KRLSGDRSSE ELSEDDDEVE 180 DDSEEERPSR SNTRKRKVAM EKSSRANNPS NAVINSTSSI QDMLKEFFQH QLRMEMQWRE 240 MMERRAHERQ LFEQEWRQSM EKLEKERLMI EQAWREREEQ RRMREESRAE RRDALLTTLL 300 NKLINESN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38250.1	5e-31	Trihelix family protein