PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027362012.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 1031aa MW: 114236 Da PI: 7.4543

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027362012.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.2	7.6e-41	146	223	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adls+ak+yhrrhkvC++hska+++lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ XP_027362012.1 146 VCQVEDCRADLSNAKDYHRRHKVCDMHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHP 223 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1031 aa Download sequence
MEAQFEGKNQ YLYGLVVPEM KGVGKRSLEW DLNDWKWDGD LFTARQLNSV PSDCRSRQLF 60 PTDPEILSNV DTSNNLSSGY DDINHGEGKR ELEKRRRGVV DEGVEMNDEA GSLNLNLGGQ 120 VYPIMEGEEK SGKKTKITGT TSSRAVCQVE DCRADLSNAK DYHRRHKVCD MHSKATKALV 180 GNVMQRFCQQ CSRFHVLQEF DEGKRSCRRR LAGHNKRRRK THPDSTVVSG GSQNEEKGSS 240 YLLMSLLRIL SNMHSNGSDE PRNQDVLSHL LRNLASLAGT TNGRNIASLL EGSQDLVKAG 300 TSGAAQDVPN TNSNGAEPSR PCGSSIKIND GLIRQDPPES RLQCETIPAN DMAQKCIASG 360 SGGVGRLKSP PGPQSSNLLL SRDSLPPHSV AAETTVGRIG LSNIDLNNVY DDVQDYAEYP 420 MNSRPPVPLG IESLDNPLQV QCDSLKSSPP QTSRNSDSTS TQSPSSSSGE AQSRTDRIVF 480 KLFGKAPNDF PLALRSQVLN WLSHSPTEIE SYIRPGCIIL TIYLRLENSA WEELCCNLGS 540 SLRKLASSND SFWRTGWVYT RVRHSVAFLY NGQVVLDVPL RLKSPQSSKI LCIKPLAVSQ 600 TASVQFIVKG FNLFQSNTRL LCSLEGKYLV QDSCYNLIDG TNTAIEHHEL QRLSFSCHIP 660 NVTGRGFIEV EDNGLSGCSF PFIVAEQEIC SEICKLESVI EAAETADDIQ IKTKLMEEKT 720 RALYFIQEMG WLLHRSRVKV RLGPMAPGQE CFHFNRFTWL VGFSMDHDWC AVMKKLLDII 780 FEGAVDTGEH TSAELALLDM GLLHRAVKRN CRPMVELLLK FVPVKASDGG DSKEKQVNKS 840 PDRFLFRPDI VGPAGLTPLH IAASMHGSEN VLEALTDDPG MVGTEAWKSA RDTTGLTPND 900 YASLRGYYSY IQLVQRKTSK KCESEHVLDI PGTLVDSNIK QKQLDGHRSS KVSSLQTEKI 960 EITSMPHQCG LCQRKLAYGG TRRALVYRPA MLSMVAIAAV CVCVALLFKS SPKVYYVFQP 1020 FSWESLEYGS I

Sequence ? help Back to Top

Protein Sequence Length: 1031 aa Download sequence

MEAQFEGKNQ YLYGLVVPEM KGVGKRSLEW DLNDWKWDGD LFTARQLNSV PSDCRSRQLF  60
PTDPEILSNV DTSNNLSSGY DDINHGEGKR ELEKRRRGVV DEGVEMNDEA GSLNLNLGGQ  120
VYPIMEGEEK SGKKTKITGT TSSRAVCQVE DCRADLSNAK DYHRRHKVCD MHSKATKALV  180
GNVMQRFCQQ CSRFHVLQEF DEGKRSCRRR LAGHNKRRRK THPDSTVVSG GSQNEEKGSS  240
YLLMSLLRIL SNMHSNGSDE PRNQDVLSHL LRNLASLAGT TNGRNIASLL EGSQDLVKAG  300
TSGAAQDVPN TNSNGAEPSR PCGSSIKIND GLIRQDPPES RLQCETIPAN DMAQKCIASG  360
SGGVGRLKSP PGPQSSNLLL SRDSLPPHSV AAETTVGRIG LSNIDLNNVY DDVQDYAEYP  420
MNSRPPVPLG IESLDNPLQV QCDSLKSSPP QTSRNSDSTS TQSPSSSSGE AQSRTDRIVF  480
KLFGKAPNDF PLALRSQVLN WLSHSPTEIE SYIRPGCIIL TIYLRLENSA WEELCCNLGS  540
SLRKLASSND SFWRTGWVYT RVRHSVAFLY NGQVVLDVPL RLKSPQSSKI LCIKPLAVSQ  600
TASVQFIVKG FNLFQSNTRL LCSLEGKYLV QDSCYNLIDG TNTAIEHHEL QRLSFSCHIP  660
NVTGRGFIEV EDNGLSGCSF PFIVAEQEIC SEICKLESVI EAAETADDIQ IKTKLMEEKT  720
RALYFIQEMG WLLHRSRVKV RLGPMAPGQE CFHFNRFTWL VGFSMDHDWC AVMKKLLDII  780
FEGAVDTGEH TSAELALLDM GLLHRAVKRN CRPMVELLLK FVPVKASDGG DSKEKQVNKS  840
PDRFLFRPDI VGPAGLTPLH IAASMHGSEN VLEALTDDPG MVGTEAWKSA RDTTGLTPND  900
YASLRGYYSY IQLVQRKTSK KCESEHVLDI PGTLVDSNIK QKQLDGHRSS KVSSLQTEKI  960
EITSMPHQCG LCQRKLAYGG TRRALVYRPA MLSMVAIAAV CVCVALLFKS SPKVYYVFQP  1020
FSWESLEYGS I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	216	222	KRRRKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	0.0	SBP family protein