PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027362054.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 127aa MW: 14345.1 Da PI: 10.0219

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027362054.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	126	1.5e-39	43	119	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C+ ++C +dls ak+y+rrhkvCe h+kapvvlvs ++qrfCqqCs+fhel efD++krsCr rLa+hnerrrk+q+ XP_027362054.1 43 CRSDECGVDLSMAKNYNRRHKVCERHAKAPVVLVSSIRQRFCQQCSKFHELAEFDNKKRSCRARLAGHNERRRKTQT 119 99************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 127 aa Download sequence
MNNEDGEVVE AVNGDKKVPN ITIKVVREKG STKSSSSSSF SFCRSDECGV DLSMAKNYNR 60 RHKVCERHAK APVVLVSSIR QRFCQQCSKF HELAEFDNKK RSCRARLAGH NERRRKTQTD 120 QSSGGDH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	99	116	KKRSCRARLAGHNERRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33810.1	1e-34	SBP family protein