PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027362424.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARR-B

Protein Properties

Length: 354aa MW: 40323.4 Da PI: 6.9439

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027362424.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	85.9	3.9e-27	167	220	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl W+ eLH +Fv+av qL G +kA+P++ile+m+v+gLt+e+v+SHLQkYRl XP_027362424.1 167 KPRLTWSRELHLEFVKAVMQL-GLNKAVPRKILEVMNVPGLTRENVASHLQKYRL 220 79*****************.******************************8 PP
2	Myb_DNA-binding	39.5	1.3e-12	169	219	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ W+ e+++ +v+av qlG + +++I + m+ g+t++++ s++qky+ XP_027362424.1 169 RLTWSRELHLEFVKAVMQLGLNkaVPRKILEVMNvPGLTRENVASHLQKYR 219 789***********************************************7 PP
3	Response_reg	63.8	8.8e-22	12	120	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vd + +v+e ++q+ + y +v+++++++ al+ ++e++ +D+il+D+ mp+mdG+e+l++ +e ++ +i+++ ++++d+l+ +++G XP_027362424.1 12 VLAVDNDINVLESIKQMGMRYCY-SVTACSNSSLALNVVRERKgcFDMILVDVHMPNMDGFEFLQHVSQEI-DVHVIMMSVDASKSDVLKSIELG 104 799******************.***************************************8877.9****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+ Kp ++e+ + XP_027362424.1 105 ACDYWLKPLSEERFKN 120 *******9998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MLPYQFSRGL RVLAVDNDIN VLESIKQMGM RYCYSVTACS NSSLALNVVR ERKGCFDMIL 60 VDVHMPNMDG FEFLQHVSQE IDVHVIMMSV DASKSDVLKS IELGACDYWL KPLSEERFKN 120 MWQHVARKSW RENKLHITLG NLDQNKSNSK EGDVDELNSC YQPPTKKPRL TWSRELHLEF 180 VKAVMQLGLN KAVPRKILEV MNVPGLTREN VASHLQKYRL NLKKNDGVVQ QQNEMLMPNA 240 GESMLFGGRL DFPQALEATG IVPYETMTYL PEQDPLMQST IQCPNNSYAE QAITHAHPLT 300 KYPSNNFPKS IVLPNGGAWP SSIDTLQHQH PLIRQLIHAI DVQPPCMMDF GSLW

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MLPYQFSRGL RVLAVDNDIN VLESIKQMGM RYCYSVTACS NSSLALNVVR ERKGCFDMIL  60
VDVHMPNMDG FEFLQHVSQE IDVHVIMMSV DASKSDVLKS IELGACDYWL KPLSEERFKN  120
MWQHVARKSW RENKLHITLG NLDQNKSNSK EGDVDELNSC YQPPTKKPRL TWSRELHLEF  180
VKAVMQLGLN KAVPRKILEV MNVPGLTREN VASHLQKYRL NLKKNDGVVQ QQNEMLMPNA  240
GESMLFGGRL DFPQALEATG IVPYETMTYL PEQDPLMQST IQCPNNSYAE QAITHAHPLT  300
KYPSNNFPKS IVLPNGGAWP SSIDTLQHQH PLIRQLIHAI DVQPPCMMDF GSLW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	3e-66	ARR-B family protein