PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027362480.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Protein Properties

Length: 383aa MW: 43833.1 Da PI: 7.7082

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027362480.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	37.3	4.8e-12	3	70	26	99
T---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 26 hggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 hgg+ + l l+ ++ +Wev +k++g+++l+kGWkeF+ L g +vF+++ ++f+l v++f++ XP_027362480.1 3 HGGN--LPNPLFLKPPDDTKWEVHW--TKHDGAIWLEKGWKEFATYYTLSHGHLIVFEYQ--ETFHLEVHIFDQ 70 5555..3445889999*******..***************************84..79******97 PP
2	B3	42	1.7e-13	291	381	4	99
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++sd+ + r v+p f++++ ++k + ++ ++ ++ W v l ++ g + l+kGW F k+ +L +gD+++F+l++ +++ ++v++f XP_027362480.1 291 FKIKSDHKRDYRPVVPIAFMRDYFSNK----KTVMLQLGNKLWPVSL--LRSMGVpTKLSKGWALFEKESKLLVGDVCIFELINIEDAVFYVHIF 379 557899***************8663....567788999***..88888889*********************98899999**9 PP -S CS B3 98 rk 99 r XP_027362480.1 380 RG 381 96 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MEHGGNLPNP LFLKPPDDTK WEVHWTKHDG AIWLEKGWKE FATYYTLSHG HLIVFEYQET 60 FHLEVHIFDQ SCLEIKYPFH DTQNDHDSFV HVTNDTVKIL EEVTPTQNNK LISPISISCP 120 PPSKKLRTTT SGVVGSSSNL QQMTQYVQIH SNKTQGTNFQ ESTLASVGEV LDGNVNENPK 180 MEQLTSKINA ALNEAATFKS NNPSCTVVLK PSYVFGRSLF KEMDLIAYTL RESHILEAEL 240 LFLKKIIYNC HALGRWKETE KTSQSSSPQS FTNGAMKEAK MFTSENPYFR FKIKSDHKRD 300 YRPVVPIAFM RDYFSNKKTV MLQLGNKLWP VSLLRSMGVP TKLSKGWALF EKESKLLVGD 360 VCIFELINIE DAVFYVHIFR GQP

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MEHGGNLPNP LFLKPPDDTK WEVHWTKHDG AIWLEKGWKE FATYYTLSHG HLIVFEYQET  60
FHLEVHIFDQ SCLEIKYPFH DTQNDHDSFV HVTNDTVKIL EEVTPTQNNK LISPISISCP  120
PPSKKLRTTT SGVVGSSSNL QQMTQYVQIH SNKTQGTNFQ ESTLASVGEV LDGNVNENPK  180
MEQLTSKINA ALNEAATFKS NNPSCTVVLK PSYVFGRSLF KEMDLIAYTL RESHILEAEL  240
LFLKKIIYNC HALGRWKETE KTSQSSSPQS FTNGAMKEAK MFTSENPYFR FKIKSDHKRD  300
YRPVVPIAFM RDYFSNKKTV MLQLGNKLWP VSLLRSMGVP TKLSKGWALF EKESKLLVGD  360
VCIFELINIE DAVFYVHIFR GQP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49480.1	4e-15	B3 family protein