PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027362682.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GATA
Protein Properties Length: 238aa    MW: 26481.7 Da    PI: 8.0603
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027362682.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.72.2e-20120154135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  XP_027362682.1 120 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 154
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MHRCCSGSQG HVMGPCTCGM FHSQTNSFSM LFSMPNHKPP YDDHSNMYDY SFSPPSSSVD  60
CTLSLGTPST RFTQDEEKRT RHLQRRSVSN FCWDLLQSQS QPTPPINTAS TNDPLLARRC  120
ANCDTTSTPL WRNGPRGPKS LCNACGIRFK KEERRASAAA AAPTAASGVV MESAQMYNSS  180
WYAHSQSQKM QCFSPAMANE FRFVDDGDRD SDNGIPFLSW RLNVTEGMGL VHDLTLKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.17e-53GATA family protein