PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027362790.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 306aa    MW: 34684.5 Da    PI: 9.0644
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027362790.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.32e-191461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++lv  v+++G g+W++++++ g+ R++k+c++rw +yl
   XP_027362790.1 14 KGPWTPEEDKKLVASVEKHGHGNWRSVPAKAGLQRCGKSCRLRWMNYL 61
                     79********************************************97 PP
2Myb_DNA-binding49.59.6e-1667110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++ eEd  +++++++lG++ W+ Ia++++ +Rt++++k++w++
   XP_027362790.1  67 RGNFSMEEDRTIIQLHALLGNR-WSIIAAHLP-KRTDNEIKNYWNT 110
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MGRTPGCEKV GLKKGPWTPE EDKKLVASVE KHGHGNWRSV PAKAGLQRCG KSCRLRWMNY  60
LKPDIKRGNF SMEEDRTIIQ LHALLGNRWS IIAAHLPKRT DNEIKNYWNT NIKKRLMRMG  120
IDPKTHKAIK SNTCEEAYGG VHQFKDTNNI CHVAQWESVG VEYEARGSIF QLGSSSSFHL  180
PRLTISKIPT QPYPSSNSPS TKHNNTMYHM FALMLATDHV GVLHSPVSML SFPVSSLSSN  240
EWKFKEGSFS YKGDCDVKIQ NNNSLTQNYV SYLQDDDIMV AVEAFRERKC ESIPDLFDGD  300
CIGRCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.14e-80MYB family protein