![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | XP_027362867.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
| Family | ERF | ||||||||
| Protein Properties | Length: 217aa MW: 23881.7 Da PI: 5.7322 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 58.4 | 1.7e-18 | 28 | 78 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ykGVr ++ +g+Wv+eIr p ++++r++lg++ t+e Aa+a++aa ++l+g
XP_027362867.1 28 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 78
59*****998.**********9...336************************998 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 217 aa Download sequence |
MVKSEHKIKT EPSKAMRSLA SSDSKKKKKY KGVRMRSWGS WVSEIRAPNQ KTRIWLGSYS 60 TPEAAARAYD AALLCLKGSS ANLNFPSSSS QYIPQDTVMS PKSIQRVAAA AANSFIDNAT 120 TPDSASSSSL VSSPSMVSSP SDQIDYDASL VSSFEAYTSC DQANESMAVM EPWYTFDGLQ 180 SPKYVDHMLS GAFFDIDSSH LLDDLYEESD IRLWSFC |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G21910.1 | 4e-27 | ERF family protein | ||||




