PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027363154.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 231aa MW: 27568.4 Da PI: 5.0878

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027363154.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.8	7.6e-16	8	55	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W +eEde+l v++lG ++W++ a+ g++R++k+c++rw +yl XP_027363154.1 8 KGTWLQEEDEQLTSFVTRLGERRWDSLAKVAGLRRSGKSCRLRWMNYL 55 799*******************************************97 PP
2	Myb_DNA-binding	54.2	3.2e-17	62	106	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g ++ eE++l+ ++ +q+G++ W++Iar+++ gRt++++k++w+++l XP_027363154.1 62 GHFSDEEEQLIFQLQQQWGNK-WSKIARRLP-GRTDNEIKNYWRTHL 106 679****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MQGEDLRKGT WLQEEDEQLT SFVTRLGERR WDSLAKVAGL RRSGKSCRLR WMNYLRPNLK 60 HGHFSDEEEQ LIFQLQQQWG NKWSKIARRL PGRTDNEIKN YWRTHLKKRP RVQQEGECKY 120 KSENAAQDFN QKSIDLASKD YNHEIFCLQE SEWETNDSST DTFPLSDWEL RSSPYETRIL 180 DWMAKLQDGY GEKELEQDCN SIVTFNYNNN PQEFVEGCDT WNYSGSLWDM N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53200.1	5e-53	MYB family protein