PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027363222.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 750aa    MW: 82235.7 Da    PI: 5.9298
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027363222.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.91.2e-2054109156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe++F+++++p++++r +L+k+l L+ +qVk+WFqNrR+++k
  XP_027363222.1  54 KKRYHRHTPHQIQELEAFFKECPHPDEKQRLDLSKRLALENKQVKFWFQNRRTQMK 109
                     688999***********************************************999 PP
2START184.94.2e-582644872206
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     la++a++el+k+ +a+ p+W ks     e++n +e+ + f++  +     + +ea r++g+v+ ++  lve+l+d++ +W e+++    +a  ++
  XP_027363222.1 264 LALAAMEELLKMTQADTPLWIKSLdgekEILNHEEYARMFSPCIGakptgYVTEATRETGIVIINSLALVETLMDVN-RWAEMFPsmiaRAVSVD 357
                     6899*************************************99989*******************************.*******99999999** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                     vissg      galq+m ae q+lsplvp R + f+R+++q+ +g+w++vdvS++   +  + ++++ +++lpSg+++++++ng+skvtw+eh++
  XP_027363222.1 358 VISSGmggtrnGALQVMHAEVQLLSPLVPvRQVRFLRFCKQHAEGVWAVVDVSIEIGHDAANAQPFMSCRRLPSGCIVQDMPNGYSKVTWLEHWE 452
                     *******************************************************99999999******************************** PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++++h+l+r+l++sg+ +ga +w atlqrqce+
  XP_027363222.1 453 YDESVVHQLYRPLLSSGVGFGAHRWIATLQRQCEC 487
                     *********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 750 aa     Download sequence    
MEGHGEMGLI GENFDTSLMG RMRDDEYESR SGSDNFEGVS GDDQDGGDDT PQRKKRYHRH  60
TPHQIQELEA FFKECPHPDE KQRLDLSKRL ALENKQVKFW FQNRRTQMKT QLERHENIML  120
RQENEKLRAE NSLMKEAMSN PVCNNCGGPA IPGQISFEEH QIRIENARLK DELNRICALA  180
NKFLGKPISS LTSPMALPTS NSGLELGIGR NGIGGSSTLG TPLPMGLDLG DGVLGTQPTM  240
SGIRPPMGLM GNEVQVERSM LIDLALAAME ELLKMTQADT PLWIKSLDGE KEILNHEEYA  300
RMFSPCIGAK PTGYVTEATR ETGIVIINSL ALVETLMDVN RWAEMFPSMI ARAVSVDVIS  360
SGMGGTRNGA LQVMHAEVQL LSPLVPVRQV RFLRFCKQHA EGVWAVVDVS IEIGHDAANA  420
QPFMSCRRLP SGCIVQDMPN GYSKVTWLEH WEYDESVVHQ LYRPLLSSGV GFGAHRWIAT  480
LQRQCECLAI LMSSSISSDD HTALSQAGRR SMLKLAQRMT GNFCSGVCAS SARKWDSLHI  540
GTLGDDMRVM TRKNVDDPGE PPGIVLSAAT SVWIPVSRQR LFDFLRDERL RSEWDILSNG  600
GPMQEMVHIA KGQGHGNCVS LLRANAVNAN DSSMLILQET WMDASCSVVV YAPVDVQSLN  660
VVMSGGDSAY VALLPSGFAI LPDGHSNNSC NGTSQKGGAN DEGGGSLLTV GFQILVNSLP  720
TAKLTVESVD TVNNLISCTI QKIKAALRVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein