PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027363224.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 730aa    MW: 80271.4 Da    PI: 6.027
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027363224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.91.1e-2068123156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe++F+++++p++++r +L+k+l L+ +qVk+WFqNrR+++k
  XP_027363224.1  68 KKRYHRHTPHQIQELEAFFKECPHPDEKQRLDLSKRLALENKQVKFWFQNRRTQMK 123
                     688999***********************************************999 PP
2START27.56.6e-10278354269
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCG CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddk 69 
                     la++a++el+k+ +a+ p+W ks     e++n +e+ + f++  +     + +ea r++g+v+ ++  lve+l+d++
  XP_027363224.1 278 LALAAMEELLKMTQADTPLWIKSLdgekEILNHEEYARMFSPCIGakptgYVTEATRETGIVIINSLALVETLMDVM 354
                     6899*************************************99989*****************************98 PP
3START1211.6e-3835346793206
                     EEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHH CS
           START  93 lmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvk 186
                     +m ae q+lsplvp R + f+R+++q+ +g+w++vdvS++   +  + ++++ +++lpSg+++++++ng+skvtw+eh++++++++h+l+r+l++
  XP_027363224.1 353 VMHAEVQLLSPLVPvRQVRFLRFCKQHAEGVWAVVDVSIEIGHDAANAQPFMSCRRLPSGCIVQDMPNGYSKVTWLEHWEYDESVVHQLYRPLLS 447
                     6899************************************99999999*********************************************** PP

                     HHHHHHHHHHHHHTXXXXXX CS
           START 187 sglaegaktwvatlqrqcek 206
                     sg+ +ga +w atlqrqce+
  XP_027363224.1 448 SGVGFGAHRWIATLQRQCEC 467
                     ******************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 730 aa     Download sequence    
MQNSSSFSFP TQRKMEGHGE MGLIGENFDT SLMGRMRDDE YESRSGSDNF EGVSGDDQDG  60
GDDTPQRKKR YHRHTPHQIQ ELEAFFKECP HPDEKQRLDL SKRLALENKQ VKFWFQNRRT  120
QMKTQLERHE NIMLRQENEK LRAENSLMKE AMSNPVCNNC GGPAIPGQIS FEEHQIRIEN  180
ARLKDELNRI CALANKFLGK PISSLTSPMA LPTSNSGLEL GIGRNGIGGS STLGTPLPMG  240
LDLGDGVLGT QPTMSGIRPP MGLMGNEVQV ERSMLIDLAL AAMEELLKMT QADTPLWIKS  300
LDGEKEILNH EEYARMFSPC IGAKPTGYVT EATRETGIVI INSLALVETL MDVMHAEVQL  360
LSPLVPVRQV RFLRFCKQHA EGVWAVVDVS IEIGHDAANA QPFMSCRRLP SGCIVQDMPN  420
GYSKVTWLEH WEYDESVVHQ LYRPLLSSGV GFGAHRWIAT LQRQCECLAI LMSSSISSDD  480
HTALSQAGRR SMLKLAQRMT GNFCSGVCAS SARKWDSLHI GTLGDDMRVM TRKNVDDPGE  540
PPGIVLSAAT SVWIPVSRQR LFDFLRDERL RSEWDILSNG GPMQEMVHIA KGQGHGNCVS  600
LLRANAVNAN DSSMLILQET WMDASCSVVV YAPVDVQSLN VVMSGGDSAY VALLPSGFAI  660
LPDGHSNNSC NGTSQKGGAN DEGGGSLLTV GFQILVNSLP TAKLTVESVD TVNNLISCTI  720
QKIKAALRVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein