PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027363617.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 442aa MW: 49379.9 Da PI: 7.3836

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027363617.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+++++++G g+W+++++ g+ R++k+c++rw +yl XP_027363617.1 14 KGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	42.9	1.1e-13	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ ++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_027363617.1 67 RGAFSQQEENMIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGAF SQQEENMIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG 120 IDPNTHKPLS EVESDKDKPP TTDKSNHKAS VGSNEVSLVD HQPKPIPTSM PADRYPLEVS 180 TGSKINNSNN SSSSNLTCST PPTQELFLDR FHDSSITTSC RPSDMVGSYF SFQQLNYGTN 240 IGLSANSNTS LCFIPSSTSS SQVMSDLNST ITSTMLHSIF PTPTHIKPTV TLHSNNNNNP 300 SISSGDIDGV HNWETSNSTN KNNGSSCNTQ LESSTNFIDN STLTWGVTES MKVNKDVQMP 360 LHAEQEEMKW SEYLNTPYIL GNTVQNQTSQ SIYSEVKPEA GFVTDESCTS WHHSQQHPPA 420 FQLSDIYTKD LPRFSVTFGQ TL

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGAF SQQEENMIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG  120
IDPNTHKPLS EVESDKDKPP TTDKSNHKAS VGSNEVSLVD HQPKPIPTSM PADRYPLEVS  180
TGSKINNSNN SSSSNLTCST PPTQELFLDR FHDSSITTSC RPSDMVGSYF SFQQLNYGTN  240
IGLSANSNTS LCFIPSSTSS SQVMSDLNST ITSTMLHSIF PTPTHIKPTV TLHSNNNNNP  300
SISSGDIDGV HNWETSNSTN KNNGSSCNTQ LESSTNFIDN STLTWGVTES MKVNKDVQMP  360
LHAEQEEMKW SEYLNTPYIL GNTVQNQTSQ SIYSEVKPEA GFVTDESCTS WHHSQQHPPA  420
FQLSDIYTKD LPRFSVTFGQ TL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKKLRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	1e-120	MYB family protein