PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027363792.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 510aa MW: 57257.2 Da PI: 7.048

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027363792.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.3	7.3e-08	383	430	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lv++v ++G g+W+ I r + Rt+ +++++w+++l XP_027363792.1 383 WTLSEVMKLVEGVSEYGVGRWTDIKRFLFsssSYRTPIDLRDKWRNLL 430 **************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MPKSKDFGHC WSHSPALCNI KESIFLIFFV NVQMDESSVP SLQDEVMEVE RLLAEPRNDH 60 VSVDSILQFN EENNGKCYDA ENLSCGFEFG LKSSSGSLDS HTTLNSKDDL ELEVLDGLLD 120 DVEIDDLEGT DGFSGACEEY FLDFDFANKA EVLGSGPSEV SLLQNSSSES HSSGLSGSSI 180 IGGVLQSTKV PNAQSECKID SLDEAATNES HGAFRNNLSQ PSNVNCMYNI SLDLQHLHEL 240 DNNHHFVGGI LSCEKEKGPV VKSQPAAHRE KRSRKPTQRY IEEFSNLRSK EKGPATGTKT 300 KHLSDPSCNE LRIRIKALKK IPGEKSSNEN NDVMFPELQV RKGRPKIEKL EYDDEPSPSE 360 SEDGSLTSKK ARRKDRRKHQ RMWTLSEVMK LVEGVSEYGV GRWTDIKRFL FSSSSYRTPI 420 DLRDKWRNLL RASTVQKFNK KEAEQNDEHA LRPLPFIVVR RVRELAKIHP YPRQRGSKKS 480 RVSPIGSSAI AKDSPPVSLS KRNVSRKKCT

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MPKSKDFGHC WSHSPALCNI KESIFLIFFV NVQMDESSVP SLQDEVMEVE RLLAEPRNDH  60
VSVDSILQFN EENNGKCYDA ENLSCGFEFG LKSSSGSLDS HTTLNSKDDL ELEVLDGLLD  120
DVEIDDLEGT DGFSGACEEY FLDFDFANKA EVLGSGPSEV SLLQNSSSES HSSGLSGSSI  180
IGGVLQSTKV PNAQSECKID SLDEAATNES HGAFRNNLSQ PSNVNCMYNI SLDLQHLHEL  240
DNNHHFVGGI LSCEKEKGPV VKSQPAAHRE KRSRKPTQRY IEEFSNLRSK EKGPATGTKT  300
KHLSDPSCNE LRIRIKALKK IPGEKSSNEN NDVMFPELQV RKGRPKIEKL EYDDEPSPSE  360
SEDGSLTSKK ARRKDRRKHQ RMWTLSEVMK LVEGVSEYGV GRWTDIKRFL FSSSSYRTPI  420
DLRDKWRNLL RASTVQKFNK KEAEQNDEHA LRPLPFIVVR RVRELAKIHP YPRQRGSKKS  480
RVSPIGSSAI AKDSPPVSLS KRNVSRKKCT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	369	377	KKARRKDRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	2e-25	MYB_related family protein