PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027363797.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 479aa MW: 53873.5 Da PI: 7.6198

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027363797.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.4	6.7e-08	352	399	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lv++v ++G g+W+ I r + Rt+ +++++w+++l XP_027363797.1 352 WTLSEVMKLVEGVSEYGVGRWTDIKRFLFsssSYRTPIDLRDKWRNLL 399 **************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MPKSKDFGHC WSHSPALCNI KESIFLIFFV NVQMDESSVP SLQDEVMEVE RLLAEPRNDH 60 VSVDSSLDSH TTLNSKDDLE LEVLDGLLDD VEIDDLEGTD GFSGACEEYF LDFDFANKAE 120 VLGSGPSEVS LLQNSSSESH SSGLSGSSII GGVLQSTKVP NAQSECKIDS LDEAATNESH 180 GAFRNNLSQP SNVNCMYNIS LDLQHLHELD NNHHFVGGIL SCEKEKGPVV KSQPAAHREK 240 RSRKPTQRYI EEFSNLRSKE KGPATGTKTK HLSDPSCNEL RIRIKALKKI PGEKSSNENN 300 DVMFPELQVR KGRPKIEKLE YDDEPSPSES EDGSLTSKKA RRKDRRKHQR MWTLSEVMKL 360 VEGVSEYGVG RWTDIKRFLF SSSSYRTPID LRDKWRNLLR ASTVQKFNKK EAEQNDEHAL 420 RPLPFIVVRR VRELAKIHPY PRQRGSKKSR VSPIGSSAIA KDSPPVSLSK RNVSRKKCT

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MPKSKDFGHC WSHSPALCNI KESIFLIFFV NVQMDESSVP SLQDEVMEVE RLLAEPRNDH  60
VSVDSSLDSH TTLNSKDDLE LEVLDGLLDD VEIDDLEGTD GFSGACEEYF LDFDFANKAE  120
VLGSGPSEVS LLQNSSSESH SSGLSGSSII GGVLQSTKVP NAQSECKIDS LDEAATNESH  180
GAFRNNLSQP SNVNCMYNIS LDLQHLHELD NNHHFVGGIL SCEKEKGPVV KSQPAAHREK  240
RSRKPTQRYI EEFSNLRSKE KGPATGTKTK HLSDPSCNEL RIRIKALKKI PGEKSSNENN  300
DVMFPELQVR KGRPKIEKLE YDDEPSPSES EDGSLTSKKA RRKDRRKHQR MWTLSEVMKL  360
VEGVSEYGVG RWTDIKRFLF SSSSYRTPID LRDKWRNLLR ASTVQKFNKK EAEQNDEHAL  420
RPLPFIVVRR VRELAKIHPY PRQRGSKKSR VSPIGSSAIA KDSPPVSLSK RNVSRKKCT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	338	346	KKARRKDRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-25	MYB_related family protein