PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027363798.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 477aa MW: 53450.7 Da PI: 6.8395

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027363798.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.4	6.7e-08	350	397	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lv++v ++G g+W+ I r + Rt+ +++++w+++l XP_027363798.1 350 WTLSEVMKLVEGVSEYGVGRWTDIKRFLFsssSYRTPIDLRDKWRNLL 397 **************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MDESSVPSLQ DEVMEVERLL AEPRNDHVSV DSILQFNEEN NGKCYDAENL SCGFEFGLKS 60 SSGSLDSHTT LNSKDDLELE VLDGLLDDVE IDDLEGTDGF SGACEEYFLD FDFANKAEVL 120 GSGPSEVSLL QNSSSESHSS GLSGSSIIGG VLQSTKVPNA QSECKIDSLD EAATNESHGA 180 FRNNLSQPSN VNCMYNISLD LQHLHELDNN HHFVGGILSC EKEKGPVVKS QPAAHREKRS 240 RKPTQRYIEE FSNLRSKEKG PATGTKTKHL SDPSCNELRI RIKALKKIPG EKSSNENNDV 300 MFPELQVRKG RPKIEKLEYD DEPSPSESED GSLTSKKARR KDRRKHQRMW TLSEVMKLVE 360 GVSEYGVGRW TDIKRFLFSS SSYRTPIDLR DKWRNLLRAS TVQKFNKKEA EQNDEHALRP 420 LPFIVVRRVR ELAKIHPYPR QRGSKKSRVS PIGSSAIAKD SPPVSLSKRN VSRKKCT

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MDESSVPSLQ DEVMEVERLL AEPRNDHVSV DSILQFNEEN NGKCYDAENL SCGFEFGLKS  60
SSGSLDSHTT LNSKDDLELE VLDGLLDDVE IDDLEGTDGF SGACEEYFLD FDFANKAEVL  120
GSGPSEVSLL QNSSSESHSS GLSGSSIIGG VLQSTKVPNA QSECKIDSLD EAATNESHGA  180
FRNNLSQPSN VNCMYNISLD LQHLHELDNN HHFVGGILSC EKEKGPVVKS QPAAHREKRS  240
RKPTQRYIEE FSNLRSKEKG PATGTKTKHL SDPSCNELRI RIKALKKIPG EKSSNENNDV  300
MFPELQVRKG RPKIEKLEYD DEPSPSESED GSLTSKKARR KDRRKHQRMW TLSEVMKLVE  360
GVSEYGVGRW TDIKRFLFSS SSYRTPIDLR DKWRNLLRAS TVQKFNKKEA EQNDEHALRP  420
LPFIVVRRVR ELAKIHPYPR QRGSKKSRVS PIGSSAIAKD SPPVSLSKRN VSRKKCT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	336	344	KKARRKDRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-25	MYB_related family protein