PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027363939.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 901aa    MW: 100147 Da    PI: 6.6777
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027363939.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.81.2e-24127228199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_027363939.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 217
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_027363939.1 218 KNQLLLGIRRA 228
                     9999****997 PP
2Auxin_resp121.65.7e-40253336183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k
  XP_027363939.1 253 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 336
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 901 aa     Download sequence    
MRLSSAGFSP PSQEGEKRVL DSELWHACAG PLVSLPAVGS RVVYFPQGHS EQVAVSTNKE  60
VDAHIPNYPS LPPQLICQLH NMTMHADAET DEVYAQMTLQ PLSPQEQKEA YLPAELGTPS  120
KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHGNEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQTVMPSSVL  240
SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPL AKYVKAVYHT RVSVGMRFRM  300
LFETEESSVR RYMGTITGIS DLDPVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT  360
TFPMYPSPFP LRLKRPWPPG LPSFHAGMKD DDFGINSPLL WLRDTDRGLQ SLNFQGIGVN  420
PWMQPRFDPS MLNMQQDMFQ AAAVQDIRSV DSSKQHPGSL LQFQQPQNIP NRTAALMQAQ  480
MLQQSQPQQI FGNNQENQHP TLSQPQTQAH LQQHMQHQHS FNSQHHHQHQ QQLQQQTQQQ  540
QQVVDSQQIS SAVSTMSQFV SAPQPQSPPM QAISSLCQQQ NFSDSNGNPV TTVVSPLHSI  600
LGSFPQDETS HLLNLTRTSS WIPVQNSSAW PSKRVAVDPL LSSGASQCVL PQLEQLGQPQ  660
STMSPNAITL PPFPGRECSI DQEGSNDPQN HLLFGVNIDP SSLLMPNGMS AIKGVNSNGD  720
SSTLPYQSSN YLNTTGPDSS LNHGMTHSIG ESGFLQTPEN AGQGNPLNKT FVKVYKSGSF  780
GRSLDITKFS SYHELRSELA RMFGLEGELE DPLRSGWQLV FVDRENDVLL LGDGPWPEFV  840
NSVWCIKILS PQEVQQMGTG LELLSSVPIQ RLSNGICDDY VSRQDPRNLS SGITTVGSLD  900
Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein