PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027364274.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family M-type_MADS
Protein Properties Length: 255aa    MW: 28686.2 Da    PI: 9.0633
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027364274.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF66.82.2e-212068149
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    k+ +n++n q tfskRr gi+KKA+EL++LC++++av++fs+  k y +
  XP_027364274.1 20 KKMSNERNLQATFSKRRSGIFKKASELCTLCNVDIAVVVFSPAHKAYSF 68
                    5679***************************************999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MSSSNDVVKK TKGRQKVEMK KMSNERNLQA TFSKRRSGIF KKASELCTLC NVDIAVVVFS  60
PAHKAYSFGS PNVDAVIQRY LTWAPPPPQT LQNMIEAHRS SNARDLNAQL ARLANQLEAE  120
KNRGEELSDS LKASQAQWWW ASPIEDMNRA QLEWLKGSLE ELKKHVTHKA QTLLIQSANF  180
NNNNSINHLF SGNSFLDVNN NLHPPSLLQN NYVFDGNMMH HHHFNNIGGY GPYAADAGFN  240
GSTQNMPSLD DTLFM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-47M-type_MADS family protein