PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027364294.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 331aa MW: 36555.9 Da PI: 7.9975

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027364294.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.9	1.4e-17	167	221	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++ +++ +++ LAk+l+L rqV vWFqNrRa+ k XP_027364294.1 167 RKKLRLSKEQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 221 778899***********************************************98 PP
2	HD-ZIP_I/II	127	8e-41	167	257	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk XP_027364294.1 167 RKKLRLSKEQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR-ALK 257 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MELALSLGDT SKAFTFLDKA TNLGSKDPPG FCIAPSFTAG KASEDKRSDD ERRGSSDPPV 60 QLNLLPFTPV LRSQPSSSHL PIPWLTQACG SARVLDVNLF PGAGAAEDGD EGTSLSSPNS 120 AVSPFQMDFS MRNGNVEFGG RNRREQEGEG ERASSRASDD DENASTRKKL RLSKEQSAFL 180 EESFKEHTTL NPKQKLALAK QLNLRPRQVE VWFQNRRART KLKQTEVDCE YLKRCCETLT 240 EENRRLQKEL QELRALKTSQ PFYMQLPATT LTMCPSCERV ATNSCTATTT TTVNNGSQIP 300 TELSLSKPRT LPFSNGQAQV HQAQAHHMAS S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	132	144	RNGNVEFGGRNRR
2	166	172	TRKKLRL
3	216	224	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	3e-74	HD-ZIP family protein