PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027364314.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C3H
Protein Properties Length: 241aa    MW: 25392.7 Da    PI: 10.0775
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027364314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH38.22.3e-12210234126
                     --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                     ykt+lC +fa+ G C +G+rC+FaHg
  XP_027364314.1 210 YKTKLCENFAK-GSCTFGERCHFAHG 234
                     9**********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MDRKRARPEA NFNGNGGAKK YRPETESFPS GLGSKSKPCT KFFSTSGCPF GEGCHFLHYV  60
PGGLKVVSQM ISVGGNPTVP QVGRNSVPPS FPDGRVGGRV EPPLATHGVA ASFGASATAK  120
ISINASLAGA VIGKNGVNSK QICRVTGAKL SIRDHDSDPN LRNIELEGSF DQIKQASAMV  180
HELILNVSSV SGPSTKNMTT QTSAPANNNY KTKLCENFAK GSCTFGERCH FAHGTGELRK  240
P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12130.14e-90C3H family protein