PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027364449.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARR-B

Protein Properties

Length: 418aa MW: 47225.8 Da PI: 6.4538

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027364449.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	79	5.9e-25	200	253	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+ W+ +H +Fveav qL G +kA Pk+ile+mkv+gLt+e+v+SHLQk+Rl XP_027364449.1 200 KPRVIWSRVMHLKFVEAVMQL-GLDKAMPKKILEVMKVPGLTRENVASHLQKFRL 253 79*****************.******************************8 PP
2	Myb_DNA-binding	27	1e-08	205	252	4	48
S-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W+ ++++v+av qlG + +k+I + m g+t++++ s++qk++ XP_027364449.1 205 WSRVMHLKFVEAVMQLGLDkaMPKKILEVMKvPGLTRENVASHLQKFR 252 5555599***************************************97 PP
3	Response_reg	72.8	1.3e-24	20	128	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vd + +v+e+++q+ +y +v+++++++ al++++e++ +D+il+D+ mp+mdG+e+lk+ +e ++pii+++ ++ +d+ + +k G XP_027364449.1 20 VLAVDNDTNVLENFEQMGIIYHY-SVTTCSNSSLALNIVRERRgyFDMILIDVHMPNMDGFEFLKRVSQET-DVPIIMISVDAATSDVMKSIKFG 112 799******************.************99999******************9988.9****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a+d+ Kp ++e+ + XP_027364449.1 113 ASDYWLKPLSKEQFKN 128 *********99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MVNFSTENMV PYQHPVGLRV LAVDNDTNVL ENFEQMGIIY HYSVTTCSNS SLALNIVRER 60 RGYFDMILID VHMPNMDGFE FLKRVSQETD VPIIMISVDA ATSDVMKSIK FGASDYWLKP 120 LSKEQFKNMW QHVARKAWRE NKLQITFGNL EDDDHKKRGN DDSESIIDRT KGVVGDQNKS 180 NSKEDAVDEL DNYYQSPTKK PRVIWSRVMH LKFVEAVMQL GLDKAMPKKI LEVMKVPGLT 240 RENVASHLQK FRLSLKKNDE VAQLQPNVDG RLGNFQALAA AGHVPCEIMA NIMPTEDQNS 300 LLQSTIQCPN NSHAEQAITY AHPLAKYPFN IANNFPLSII PLDDASTRYG AWPSSSTIDS 360 VRVTDTLQHQ HPLMHQLIHS INVQPSCMVD SGSLVSIMQH CNFCSNNSVM DYGLLSPQ

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MVNFSTENMV PYQHPVGLRV LAVDNDTNVL ENFEQMGIIY HYSVTTCSNS SLALNIVRER  60
RGYFDMILID VHMPNMDGFE FLKRVSQETD VPIIMISVDA ATSDVMKSIK FGASDYWLKP  120
LSKEQFKNMW QHVARKAWRE NKLQITFGNL EDDDHKKRGN DDSESIIDRT KGVVGDQNKS  180
NSKEDAVDEL DNYYQSPTKK PRVIWSRVMH LKFVEAVMQL GLDKAMPKKI LEVMKVPGLT  240
RENVASHLQK FRLSLKKNDE VAQLQPNVDG RLGNFQALAA AGHVPCEIMA NIMPTEDQNS  300
LLQSTIQCPN NSHAEQAITY AHPLAKYPFN IANNFPLSII PLDDASTRYG AWPSSSTIDS  360
VRVTDTLQHQ HPLMHQLIHS INVQPSCMVD SGSLVSIMQH CNFCSNNSVM DYGLLSPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	2e-65	ARR-B family protein