PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027364554.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

GeBP

Protein Properties

Length: 386aa MW: 44005.4 Da PI: 4.7751

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027364554.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	81.4	1.3e-25	137	234	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 + qrlw+++De+ lL+G +d+++++ ++d+ +y+ v+ +++++++k+qlveK+rrLK+K k +k ++ke+ f+++++ ife+s+ XP_027364554.1 137 QYQRLWTKQDEMELLKGYLDYTKQHRRataTLQNDVAMLYDHVRPKLNVEFNKNQLVEKLRRLKRKHKLALDK-GKEKEVLFKNPQELAIFEISH 230 579****************7776554544556***********************************.889999*********** PP DUF573 94 kiWg 97 kiWg XP_027364554.1 231 KIWG 234 *8 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MHNCHKRISG YLDTLICGKR KCSVSSTMLL PLVSWMFSPS SPSSSSSEEE KEEESLDINT 60 DQNDNVEDEE NDLFLSSSDV DDTIPIALAV PNASPAVTVA FPADDERNTV ATTATATIII 120 TRSKGQQTAN YSGMVRQYQR LWTKQDEMEL LKGYLDYTKQ HRRATATLQN DVAMLYDHVR 180 PKLNVEFNKN QLVEKLRRLK RKHKLALDKG KEKEVLFKNP QELAIFEISH KIWGNDKDII 240 GQDALDDDES GRTPDCHDLV GNVKVKIEHP DNSDEIDNRA PKRPRLIIDD LNGTNEQNNG 300 DGDTSIHSFI EETMRSCFSP LIQELLDEAQ EEQFGGLPLI PLPIYPGEVG DERWQKRRIL 360 ELEVYLKRLE LLRDQIKTKL EELRSS

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MHNCHKRISG YLDTLICGKR KCSVSSTMLL PLVSWMFSPS SPSSSSSEEE KEEESLDINT  60
DQNDNVEDEE NDLFLSSSDV DDTIPIALAV PNASPAVTVA FPADDERNTV ATTATATIII  120
TRSKGQQTAN YSGMVRQYQR LWTKQDEMEL LKGYLDYTKQ HRRATATLQN DVAMLYDHVR  180
PKLNVEFNKN QLVEKLRRLK RKHKLALDKG KEKEVLFKNP QELAIFEISH KIWGNDKDII  240
GQDALDDDES GRTPDCHDLV GNVKVKIEHP DNSDEIDNRA PKRPRLIIDD LNGTNEQNNG  300
DGDTSIHSFI EETMRSCFSP LIQELLDEAQ EEQFGGLPLI PLPIYPGEVG DERWQKRRIL  360
ELEVYLKRLE LLRDQIKTKL EELRSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	2e-33	GeBP family protein