PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027364560.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 225aa    MW: 25252 Da    PI: 9.8905
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027364560.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding551.9e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+  ++++G g+W++ ++  g+ R++k+c++rw +yl
   XP_027364560.1 14 KGPWTPEEDQILISHIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding55.41.4e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++++eE+e++++++  lG++ W++Ia++++ gRt++++k++w+++l
   XP_027364560.1  67 RGKFSKEEEEIILKLHGILGNR-WSSIAAKLP-GRTDNEIKNFWHTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MVRTPCCEKM GLKKGPWTPE EDQILISHIQ LYGHGNWRAL PKQAGLLRCG KSCRLRWINY  60
LRPDIKRGKF SKEEEEIILK LHGILGNRWS SIAAKLPGRT DNEIKNFWHT HLKKRLERSE  120
VHSMMNASSN PLQEAQAASS SGTLINMARV GVDGATTSSV TGKVLIANDS LHLRRNPSIR  180
LGLYGAVSSD MSGGTIGNNS PSEFGEEMEF WYNMFMSSHH KGMEM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.18e-74MYB family protein