PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027364657.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 290aa MW: 32249.2 Da PI: 7.832

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027364657.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.5	2.4e-05	110	129	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ XP_027364657.1 110 FSCTVCNKTFNRFNNMQMHM 129 89*****************9 PP
2	zf-C2H2	11.9	0.0007	195	217	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C k+F + + ++H +++ XP_027364657.1 195 FECRKCLKPFAVRGDWRTHEKNC 217 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MQKTISFSCV SSCGSESGCL EAGEVDHPDS ISLSLAPPGQ PKSKHPNPDP NHSDHDHHIV 60 NPTSHAHSAV TVALHIGLPT TATTPSSIPN IQPQYWIPTP QQILIGPTQF SCTVCNKTFN 120 RFNNMQMHMW GHGSQYRKGP ESLRGSKPAS SVLGLPCYCC AEGCKNNINY PRARPLKDFR 180 TLQTHYKRKH GGKSFECRKC LKPFAVRGDW RTHEKNCGKL WFCVCGSDFK HKRSLKDHVR 240 AFGSGHAPHT LESLICDRER GHEDYVEEEE EDGGDDNSEV VAVTFSNNTM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-111	C2H2 family protein