PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027364660.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family Trihelix
Protein Properties Length: 338aa    MW: 38304.9 Da    PI: 9.8747
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027364660.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix59.11.1e-1852150286
        trihelix   2 WtkqevlaLiearremeerlrrgk..............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 
                     Wt qe+l Li+a++ ++er  r++              + + +W++v ++++ +g+ rs++qC++kw+nl ++ykk+++ ++k ++ + + +p +
  XP_027364660.1  52 WTIQETLILITAKKLDDERRMRTSstphdptnttttrtSGELRWKWVENYCWNHGCLRSQNQCNDKWDNLLRDYKKVRDYDSKSQQSNNKDFPSY 146
                     *************966665555444777888888888899*******************************************999999999999 PP

        trihelix  83 dqle 86 
                      +l+
  XP_027364660.1 147 WSLN 150
                     9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MSEPSTTPLA PPPLLPDPHR QHHHAPLIQS GTTAGPSSSS SSLVREYRKG NWTIQETLIL  60
ITAKKLDDER RMRTSSTPHD PTNTTTTRTS GELRWKWVEN YCWNHGCLRS QNQCNDKWDN  120
LLRDYKKVRD YDSKSQQSNN KDFPSYWSLN KQQRKEQNLP SNMVFEVYQA ITEVLQRKQT  180
QRQPALPLVT SSPLQTALPL PPPPPPPPPL PPQQQQQPLP PPQAPVSSTT PAGSERSESS  240
GTEHSEDDDG SESKRRKVKN LGSSIMRSAS VLARALRNCE EKKEKRHREL IELEQRRLQM  300
EEARNEVHRQ GIATLVAAVT NLSGAIQSLI NPERHGQR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1254285KRRKVKNLGSSIMRSASVLARALRNCEEKKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.13e-47Trihelix family protein