PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027364661.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 285aa MW: 32211.1 Da PI: 8.1153

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027364661.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.3	1.1e-15	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd++l+++v+ +G g W+ +++ g++R++k+ ++rw++yl XP_027364661.1 15 RGAWSAEEDQILINYVQVHGEGKWRELSKRAGLKRSGKSSRLRWLNYL 62 89********************************************97 PP
2	Myb_DNA-binding	47.3	4.7e-15	68	110	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+ + +E++l+++++++lG++ W++Ia +++ gRt++++k++w+ XP_027364661.1 68 RGNISSDEEDLIIRLHNLLGNR-WSLIAGRLP-GRTDNEIKNYWN 110 78999***************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MPRKTSCENQ DAVNRGAWSA EEDQILINYV QVHGEGKWRE LSKRAGLKRS GKSSRLRWLN 60 YLKPDVKRGN ISSDEEDLII RLHNLLGNRW SLIAGRLPGR TDNEIKNYWN ARLRKKLEKK 120 KCNHSITPHL HSNKVPSKLR VEPVECTKNS SHGIATTKSS IPTKVMVSKY AANDSVNTMN 180 SVTCWDSHNP SACTPEDDHD NCSSGFHKPF EICDQLMISY EDSHYGYACV EIPEHFGDEA 240 TCWLDDSIDQ VTQKSTKSNS MSCLNEQNPS TLHGGTTMST SNFIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	3e-55	MYB family protein