PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027364715.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 309aa MW: 35047.5 Da PI: 7.0963

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027364715.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	63	6e-20	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde lv+++k++G g+W+t +++ g+ R++k+c++rw +yl XP_027364715.1 14 RGAWTPEEDEALVEYIKKHGHGSWRTLPKHAGLLRCGKSCRLRWINYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	53.4	6e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE+ +++++ +lG++ W++Ia+ ++ gRt++++k++w+++l XP_027364715.1 67 RGPFTNEEENTIIQLHGMLGNR-WAAIASQLP-GRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MGKAPCCEKH GVRRGAWTPE EDEALVEYIK KHGHGSWRTL PKHAGLLRCG KSCRLRWINY 60 LRPGIKRGPF TNEEENTIIQ LHGMLGNRWA AIASQLPGRT DNEIKNYWNT HLKKRILRSC 120 HSQRAKQPCI LPDQRIAKSE SPSTRHMVQW ESARVEAEAR LSMESSLLNS WSMNNACPDY 180 FLQLWHSEVG QSFRMIKGKE GIVCQSPFSQ PSSSSKLESC SDVSLQVKNT GNSCYTYNPM 240 LEDVNMIQEH TSSYKPKLED DTGGSESGNF EFLDTSDSAL KHLLDMPDTD IGFLEHNDNF 300 LNLLDGTCD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	2e-94	MYB family protein