PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027364721.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family LBD
Protein Properties Length: 150aa    MW: 17050.6 Da    PI: 8.0548
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027364721.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26097.31.6e-3051071100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee..redamsslvy.eAearardPvyGavgvilklqqqleqlka 92 
                     +CaaCk+++rkC++dC+++pyfp ++p+++  vh+++G snv k+l+  ++ +   e+  ++++y eAe+r++dP+yG++g i++  qq++++++
  XP_027364721.1   5 RCAACKIQGRKCPSDCIFSPYFPLNDPQRYTSVHRIYGGSNVGKMLQCFSKFHplSEHRQQTVLYdEAECRIQDPIYGCYGNISERVQQINSTES 99 
                     6************************************************876645688889999979**************************** PP

          DUF260  93 elallkee 100
                     ela+++++
  XP_027364721.1 100 ELAKIQSH 107
                     ***99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MVSSRCAACK IQGRKCPSDC IFSPYFPLND PQRYTSVHRI YGGSNVGKML QCFSKFHPLS  60
EHRQQTVLYD EAECRIQDPI YGCYGNISER VQQINSTESE LAKIQSHISI LKLQNPQLVN  120
ESNFDVLLHR AELDRFSLAA MQAKLLGLII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26660.13e-35LBD family protein