PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027364723.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 213aa    MW: 24635.2 Da    PI: 9.6186
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027364723.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.59.7e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+ien + rqvtfskRrng+lKKA+ELSvLCda+vaviifs++g+l+e+ss
  XP_027364723.1  9 KKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVAVIIFSQRGRLFEFSS 59
                    68***********************************************96 PP
2K-box67.35.1e-23771725100
           K-box   5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     ++++l ++  ++l+ ++a + ++ie L+ + R+llG +L+++s+ eLq +e+qL +sl ++R +K el++eqie+lq  e +l +en +L+++++
  XP_027364723.1  77 HTNKLRDEYIQQLKFDSASMAEKIEHLELSRRKLLGHNLSPCSYGELQGIEDQLLRSLHSVRLRKAELYMEQIEHLQSLESNLVKENAELNAMWA 171
                     4556899999********************************************************************************99987 PP

           K-box 100 e 100
                     e
  XP_027364723.1 172 E 172
                     5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MVRGKIQMKK IENATSRQVT FSKRRNGLLK KAYELSVLCD AQVAVIIFSQ RGRLFEFSSS  60
DMTKILERHR KYSKDVHTNK LRDEYIQQLK FDSASMAEKI EHLELSRRKL LGHNLSPCSY  120
GELQGIEDQL LRSLHSVRLR KAELYMEQIE HLQSLESNLV KENAELNAMW AEKTSQQQCG  180
RHKQAEAEAA PRCSNSQSLD VETDLFIGLP KQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62165.32e-74MIKC_MADS family protein