PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027364725.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 227aa    MW: 26352.1 Da    PI: 9.505
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027364725.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.73.6e-29959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    +ri+nk+nrqvtfskRr g+lKKA+ELSvLCdae+a+iifss+gkl+ yss
  XP_027364725.1  9 ERIQNKINRQVTFSKRRSGLLKKAFELSVLCDAEIALIIFSSRGKLFQYSS 59
                    69***********************************************96 PP
2K-box691.6e-2378171598
           K-box   5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     ++++  e +++ l+qel  L+ + e+L+r+qR++lGe+Le+LslkeLq+Le+qL+k + + R+++++ l++ i+el +k ++l+e nk L++k 
  XP_027364725.1  78 KTSDIVELQSQCLYQELLILRVKHESLERSQRNFLGEELEPLSLKELQSLEKQLDKTIAQARKHQTQKLMARIDELCEKVQNLEEVNKHLESKE 171
                     4555778889********************************************************************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MGRGRVVLER IQNKINRQVT FSKRRSGLLK KAFELSVLCD AEIALIIFSS RGKLFQYSST  60
DINRIIEKYR QCCFNMSKTS DIVELQSQCL YQELLILRVK HESLERSQRN FLGEELEPLS  120
LKELQSLEKQ LDKTIAQARK HQTQKLMARI DELCEKVQNL EEVNKHLESK ERDKCTQQIC  180
EGSTNSTPFV YNNNHIQVNQ FQSGTTGWFR RQQAAASKGK AIDRHGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.15e-56MIKC_MADS family protein