PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027364795.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 222aa MW: 24171.6 Da PI: 8.4862

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027364795.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	89.8	3.5e-28	4	108	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++C++lr++C+++C+++p++ p++q++++ +++k++G++ +l+l++a+++++ +++++sl+yeA+ r+ +P yG++g+++++++ +++ XP_027364795.1 4 SCNGCRILRKGCSEKCIIRPCLewinsPESQANATLFLAKFYGRTALLNLINAASQHHAPAVFKSLLYEACGRLVNPTYGSLGLFWTGEWAQCEA 98 6********************************************************************************************** PP DUF260 91 kaelallkee 100 +++++l++++ XP_027364795.1 99 AVDAVLTGTK 108 *999988766 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MKLSCNGCRI LRKGCSEKCI IRPCLEWINS PESQANATLF LAKFYGRTAL LNLINAASQH 60 HAPAVFKSLL YEACGRLVNP TYGSLGLFWT GEWAQCEAAV DAVLTGTKIN GVAAFDWVTA 120 GTLGGSDHVP PACDTGHVAR GINVDYVRGR TGLKRVGQVT KPKPRVGSAD SAWLWKPAWE 180 RESVESVEAS LVSQDEPNRT ALDLELTLGF NCETTSGKKR RY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67100.1	8e-56	LBD family protein