PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027364877.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 517aa MW: 55530.9 Da PI: 9.0669

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027364877.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.1e-05	90	112	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_027364877.1 90 FICEICNKGFQRDQNLQLHRRGH 112 89*******************88 PP
2	zf-C2H2	11.2	0.0012	166	188	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_027364877.1 166 WKCDKCSKKYAVQSDWKAHSKIC 188 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MSNITSCDSG SFSTENTRED ALKQQQEMLG QFHSPHSHTS TTTTNNSNGS NNNSQPPAPV 60 KKKRSLPGNP DPSAEVIALS PNTLMATNRF ICEICNKGFQ RDQNLQLHRR GHNLPWKLKQ 120 RTSTEIRKRV YVCPEPSCVH HNPARALGDL TGIKKHFCRK HGEKKWKCDK CSKKYAVQSD 180 WKAHSKICGT REYKCDCGTI FSRRDSFISH RAFCDALAEE NNKANEGQLS KIGSNMQCQP 240 IPNLVSSLPL NTNIPNPQIG GASKFNHSDH KHPLSLPQEL MPMPSAKPFN SNMPGNLFTR 300 SLSSTSSPSL QLSSNMFEEN GLHLAAGSPH MSATALLQKA AQMGATVTEK TFATNMAPPS 360 FGVVQQQQQP NGQSFMNQYM HNGQHDINIS AQYTNFGANG MGGGGVGMNG VDMFNAILDQ 420 SKALSKIIEQ NSRSNSGGPT NGGSSSAINI GGTKGSGDVT TLDLLGIGGG GGGGAAAAHG 480 NFYGGTQQAE SGAADEVWRN WSSKNAGFES FSATSSI

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MSNITSCDSG SFSTENTRED ALKQQQEMLG QFHSPHSHTS TTTTNNSNGS NNNSQPPAPV  60
KKKRSLPGNP DPSAEVIALS PNTLMATNRF ICEICNKGFQ RDQNLQLHRR GHNLPWKLKQ  120
RTSTEIRKRV YVCPEPSCVH HNPARALGDL TGIKKHFCRK HGEKKWKCDK CSKKYAVQSD  180
WKAHSKICGT REYKCDCGTI FSRRDSFISH RAFCDALAEE NNKANEGQLS KIGSNMQCQP  240
IPNLVSSLPL NTNIPNPQIG GASKFNHSDH KHPLSLPQEL MPMPSAKPFN SNMPGNLFTR  300
SLSSTSSPSL QLSSNMFEEN GLHLAAGSPH MSATALLQKA AQMGATVTEK TFATNMAPPS  360
FGVVQQQQQP NGQSFMNQYM HNGQHDINIS AQYTNFGANG MGGGGVGMNG VDMFNAILDQ  420
SKALSKIIEQ NSRSNSGGPT NGGSSSAINI GGTKGSGDVT TLDLLGIGGG GGGGAAAAHG  480
NFYGGTQQAE SGAADEVWRN WSSKNAGFES FSATSSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-101	C2H2 family protein