PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027364878.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 459aa MW: 49379.5 Da PI: 9.1667

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027364878.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.7e-05	32	54	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_027364878.1 32 FICEICNKGFQRDQNLQLHRRGH 54 89*******************88 PP
2	zf-C2H2	11.4	0.001	108	130	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_027364878.1 108 WKCDKCSKKYAVQSDWKAHSKIC 130 58*****************9876 PP
3	zf-C2H2	10.6	0.0018	138	156	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg+ Fsr++++ +H + XP_027364878.1 138 DCGTIFSRRDSFISHRAFC 156 9**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MLIPTILYNK NSDPSAEVIA LSPNTLMATN RFICEICNKG FQRDQNLQLH RRGHNLPWKL 60 KQRTSTEIRK RVYVCPEPSC VHHNPARALG DLTGIKKHFC RKHGEKKWKC DKCSKKYAVQ 120 SDWKAHSKIC GTREYKCDCG TIFSRRDSFI SHRAFCDALA EENNKANEGQ LSKIGSNMQC 180 QPIPNLVSSL PLNTNIPNPQ IGGASKFNHS DHKHPLSLPQ ELMPMPSAKP FNSNMPGNLF 240 TRSLSSTSSP SLQLSSNMFE ENGLHLAAGS PHMSATALLQ KAAQMGATVT EKTFATNMAP 300 PSFGVVQQQQ QPNGQSFMNQ YMHNGQHDIN ISAQYTNFGA NGMGGGGVGM NGVDMFNAIL 360 DQSKALSKII EQNSRSNSGG PTNGGSSSAI NIGGTKGSGD VTTLDLLGIG GGGGGGAAAA 420 HGNFYGGTQQ AESGAADEVW RNWSSKNAGF ESFSATSSI

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MLIPTILYNK NSDPSAEVIA LSPNTLMATN RFICEICNKG FQRDQNLQLH RRGHNLPWKL  60
KQRTSTEIRK RVYVCPEPSC VHHNPARALG DLTGIKKHFC RKHGEKKWKC DKCSKKYAVQ  120
SDWKAHSKIC GTREYKCDCG TIFSRRDSFI SHRAFCDALA EENNKANEGQ LSKIGSNMQC  180
QPIPNLVSSL PLNTNIPNPQ IGGASKFNHS DHKHPLSLPQ ELMPMPSAKP FNSNMPGNLF  240
TRSLSSTSSP SLQLSSNMFE ENGLHLAAGS PHMSATALLQ KAAQMGATVT EKTFATNMAP  300
PSFGVVQQQQ QPNGQSFMNQ YMHNGQHDIN ISAQYTNFGA NGMGGGGVGM NGVDMFNAIL  360
DQSKALSKII EQNSRSNSGG PTNGGSSSAI NIGGTKGSGD VTTLDLLGIG GGGGGGAAAA  420
HGNFYGGTQQ AESGAADEVW RNWSSKNAGF ESFSATSSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	3e-95	C2H2 family protein