PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027364990.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 217aa MW: 25350.7 Da PI: 8.4107

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027364990.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.4	2.8e-19	56	109	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ ++t++ql+ Le+ F+k+ +++ +++ +L+k+lgL+ rq+ +WFqNrRa++k XP_027364990.1 56 KKKRLTSDQLDSLESSFQKEIKLDPDRKMKLSKELGLQPRQIAIWFQNRRARWK 109 56779************************************************9 PP
2	HD-ZIP_I/II	118	5.2e-38	55	146	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekk+rl+++q+ +LE+sF++e kL+p+rK++l++eLglqprq+a+WFqnrRAR+ktkqlE+ y++Lk+++d + +e+++Le+ev +L++ l+ XP_027364990.1 55 EKKKRLTSDQLDSLESSFQKEIKLDPDRKMKLSKELGLQPRQIAIWFQNRRARWKTKQLESLYDTLKQEFDVIFKEKQKLEEEVMKLKAMLR 146 69**************************************************************************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MEWNGSTRRY VPRPESSLSF LYNYSYTPYP GMEVKQQALA ETPPSMEKMN CGNQEKKKRL 60 TSDQLDSLES SFQKEIKLDP DRKMKLSKEL GLQPRQIAIW FQNRRARWKT KQLESLYDTL 120 KQEFDVIFKE KQKLEEEVMK LKAMLRDQAS RTQVSTGYTE ISGEETVEST SEALRCSKRG 180 TLHHHQNIGE GNCSFILEDY NNTVPVLPYW PGATYYP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	56	85	KKKRLTSDQLDSLESSFQKEIKLDPDRKMK
2	104	112	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	3e-56	HD-ZIP family protein