PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027365438.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 649aa MW: 72305.1 Da PI: 5.1729

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027365438.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44	3.8e-14	456	502	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ XP_027365438.1 456 NHVLAERRRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYVKQLR 502 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 649 aa Download sequence
MAAPLGSRLQ SMLQAAVQSV QWTYSLFWQL CPQQVILVWG DGYYNGAIKT RKTVQPMEVS 60 AEEASLQRSQ QLRELYESLS AGDTNPPTRR PCAALSPEDL TESEWFYLMC VSFSFPPDVG 120 LPGKAYARRQ HVWLTGANEV DSKTFSRAIL AKSARIQTVV CIPLLDGVVE FGTTEKVQED 180 LNFIQHVKSF FLDHHHPLPP KPALSEHSTS NPTSSSDHIP TVMYTVADPP PTHTINQNDM 240 DEDEEEEEDE AESASEDETG GHIAGPATTP DTAAEPSELM QLEMPEDIRV GSPNDGSNNL 300 DSDFHLLAVS QTGNPSGQAE STRRWAPIQD PLQVQLPVSA PHPLEDLTQE DTHYSQTVSN 360 ILQNQFSRWT HSSPSVGYIP YSNLSAFAKW TTLADHHFHA PVDGTNQWLL KYILFTVPYL 420 HAKTPDDNSP QNRDTAAADT ARLRGKGTPQ DELSANHVLA ERRRREKLNE RFIILRSLVP 480 FVTKMDKASI LGDTIEYVKQ LRRKIQELEA RNRQMEADAT VQRTSSSSSK EQQRSGITVM 540 EKRKVRIVEG NGVKAKAVEV EASTSVQVSI IESDALLELE CPHREGLLLD VMQMLREVRI 600 EVIGVQSSLN NGVFVAELRA KVKENANGKK VSIVEVKRAL NQIIPHSVD

Sequence ? help Back to Top

Protein Sequence Length: 649 aa Download sequence

MAAPLGSRLQ SMLQAAVQSV QWTYSLFWQL CPQQVILVWG DGYYNGAIKT RKTVQPMEVS  60
AEEASLQRSQ QLRELYESLS AGDTNPPTRR PCAALSPEDL TESEWFYLMC VSFSFPPDVG  120
LPGKAYARRQ HVWLTGANEV DSKTFSRAIL AKSARIQTVV CIPLLDGVVE FGTTEKVQED  180
LNFIQHVKSF FLDHHHPLPP KPALSEHSTS NPTSSSDHIP TVMYTVADPP PTHTINQNDM  240
DEDEEEEEDE AESASEDETG GHIAGPATTP DTAAEPSELM QLEMPEDIRV GSPNDGSNNL  300
DSDFHLLAVS QTGNPSGQAE STRRWAPIQD PLQVQLPVSA PHPLEDLTQE DTHYSQTVSN  360
ILQNQFSRWT HSSPSVGYIP YSNLSAFAKW TTLADHHFHA PVDGTNQWLL KYILFTVPYL  420
HAKTPDDNSP QNRDTAAADT ARLRGKGTPQ DELSANHVLA ERRRREKLNE RFIILRSLVP  480
FVTKMDKASI LGDTIEYVKQ LRRKIQELEA RNRQMEADAT VQRTSSSSSK EQQRSGITVM  540
EKRKVRIVEG NGVKAKAVEV EASTSVQVSI IESDALLELE CPHREGLLLD VMQMLREVRI  600
EVIGVQSSLN NGVFVAELRA KVKENANGKK VSIVEVKRAL NQIIPHSVD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	461	466	ERRRRE
2	462	467	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	1e-103	bHLH family protein