PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027365468.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 409aa MW: 45059.7 Da PI: 7.9179

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027365468.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60.2	5e-19	103	189	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L+ea++e+ ++l+rg+l++ +We+v++++ r + ++s +qCk+k +nl+kryk ++++++++ + s+s +p+f+qle XP_027365468.1 103 EWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEDVAAVVseRCENQSKSVEQCKNKVDNLKKRYKLERHRMSSG-CISTSPWPWFKQLE 189 5***********************************666677899*********************9.99999******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MASCDDDDDF SLLRDDNHPL HHQPYAPHHH FSPSAVAVAS VPPKPVANDA EDYGNPFDDD 60 GGSEKRKECE EIGDGTTSYG FNKRSKAPPS STAGAEYRKD REEWSDTAIV CLLEAYTEKF 120 TQLNRGNLRG RDWEDVAAVV SERCENQSKS VEQCKNKVDN LKKRYKLERH RMSSGCISTS 180 PWPWFKQLEQ IVGNSLPAKF ADEDKAVVSA GTSPRQSKRY GVATPSSGGQ ANNMKSKALS 240 NLRWRRVVLK ISGAALTASD TCNIDPKVAM LVSREVAKAS RLGVEVAIVV GGRNFFCGDA 300 WVTATGLERC TAYQVGMMAT VMNSILLQST LEKMGVQTRV QTSVAMQEFA EPYNRQRAIR 360 HLEKGRVVIF GGIGFGTGNP LFSTDIAAAL RASERSWGQE ASLLWMCQH

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MASCDDDDDF SLLRDDNHPL HHQPYAPHHH FSPSAVAVAS VPPKPVANDA EDYGNPFDDD  60
GGSEKRKECE EIGDGTTSYG FNKRSKAPPS STAGAEYRKD REEWSDTAIV CLLEAYTEKF  120
TQLNRGNLRG RDWEDVAAVV SERCENQSKS VEQCKNKVDN LKKRYKLERH RMSSGCISTS  180
PWPWFKQLEQ IVGNSLPAKF ADEDKAVVSA GTSPRQSKRY GVATPSSGGQ ANNMKSKALS  240
NLRWRRVVLK ISGAALTASD TCNIDPKVAM LVSREVAKAS RLGVEVAIVV GGRNFFCGDA  300
WVTATGLERC TAYQVGMMAT VMNSILLQST LEKMGVQTRV QTSVAMQEFA EPYNRQRAIR  360
HLEKGRVVIF GGIGFGTGNP LFSTDIAAAL RASERSWGQE ASLLWMCQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.2	1e-145	Trihelix family protein