PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027365488.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 512aa MW: 55296.6 Da PI: 9.4172

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027365488.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.4	2.6e-05	6	28	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_027365488.1 6 FICEVCNKGFQREQNLQLHRRGH 28 89*******************88 PP
2	zf-C2H2	12.1	0.0006	82	104	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ XP_027365488.1 82 WKCDKCSKKYAVQSDWKAHSKTC 104 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MATNRFICEV CNKGFQREQN LQLHRRGHNL PWKLKQKTTK EPKKKVYLCP EPTCVHHDPS 60 RALGDLTGIK KHYSRKHGEK KWKCDKCSKK YAVQSDWKAH SKTCGTREYR CDCGTLFSRR 120 DSFITHRAFC DALAQESARQ PPNLGGAISG HNLYGSNNMA LNLSQVGPNM QDQNNQPNEL 180 LRLGGGAGRT GQFDHIIGSP FRSSQQPFFM PEPNQNYHHH PEQQQCLVQN KPFQGLMQLS 240 DLNNNHHHNN SVNNSPSAGS TLFNLPFLSS NTTNTTNTSF SEHFNNATNN GNAGGNNEGT 300 NFFTTSSAPS LFSTSLQGGS NNNNNNNSAI SHMSATALLQ KAAQMGATSS NSTASLLKSF 360 GSGSSSSGGS KSDHRPLVAA ANYGGIFGGS EHSSNSNLQD LMNSFAVSGN SSLFESGSSG 420 GFSVTGFEAY DHNNRDPKLH PMNIGGSDRL TRDFLGVGQI VRSMSGGGGG GVSVSHREQH 480 QQRGFNLSSM EAERNNAAAS GQSFGGGGGN FQ

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MATNRFICEV CNKGFQREQN LQLHRRGHNL PWKLKQKTTK EPKKKVYLCP EPTCVHHDPS  60
RALGDLTGIK KHYSRKHGEK KWKCDKCSKK YAVQSDWKAH SKTCGTREYR CDCGTLFSRR  120
DSFITHRAFC DALAQESARQ PPNLGGAISG HNLYGSNNMA LNLSQVGPNM QDQNNQPNEL  180
LRLGGGAGRT GQFDHIIGSP FRSSQQPFFM PEPNQNYHHH PEQQQCLVQN KPFQGLMQLS  240
DLNNNHHHNN SVNNSPSAGS TLFNLPFLSS NTTNTTNTSF SEHFNNATNN GNAGGNNEGT  300
NFFTTSSAPS LFSTSLQGGS NNNNNNNSAI SHMSATALLQ KAAQMGATSS NSTASLLKSF  360
GSGSSSSGGS KSDHRPLVAA ANYGGIFGGS EHSSNSNLQD LMNSFAVSGN SSLFESGSSG  420
GFSVTGFEAY DHNNRDPKLH PMNIGGSDRL TRDFLGVGQI VRSMSGGGGG GVSVSHREQH  480
QQRGFNLSSM EAERNNAAAS GQSFGGGGGN FQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-79	C2H2 family protein