PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027365501.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 512aa MW: 56805.3 Da PI: 6.1331

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027365501.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21	8.5e-07	261	282	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H XP_027365501.1 261 FCTICGKGFKRDANLRMHMRGH 282 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MDPPKGSLCA NNWARSSTLT SPGNGLQNNL SSDPSSFYGV RIESPFKEFN QPSPTQSALP 60 GESNKDIEIP DQENCPLNDS SDTSKVQDWD PSSMLNNLSF LEEKIHQLRD LVHLIVNKKC 120 QPFGQPHELV TQEQQLITAD LTSIIVQLIS TAGSLLPSVR HTLTNTNPVV GQLGQLRGIN 180 LPFGSDPSSG IRPQNNSGNK LFDQSTHNDP PNNCEMEQNY NMEEHEPKDE EDVDEGENLP 240 PGSYEILQLE KEEILAPHTH FCTICGKGFK RDANLRMHMR GHGDEYKTPA ALAKPHKETG 300 SEPKLIKRYS CPYAGCKRNK DHKKFQPLKT ILCVKNHYKR THCDKSYTCS RCNTKKFSVM 360 ADLKTHEKHC GKDKWLCSCG TTFSRKDKLF GHIALFQGHT PAIPLDDTKG VAEPRDLQSR 420 ENSSMVGSMN FCFGSNPSSE NVVQNIMDAK GNIDDPINYF SSLNFEGCNF GGFNDFSQPP 480 FEDSEGSFSF LMSGSFNCAP KSGGGESSSD NL

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MDPPKGSLCA NNWARSSTLT SPGNGLQNNL SSDPSSFYGV RIESPFKEFN QPSPTQSALP  60
GESNKDIEIP DQENCPLNDS SDTSKVQDWD PSSMLNNLSF LEEKIHQLRD LVHLIVNKKC  120
QPFGQPHELV TQEQQLITAD LTSIIVQLIS TAGSLLPSVR HTLTNTNPVV GQLGQLRGIN  180
LPFGSDPSSG IRPQNNSGNK LFDQSTHNDP PNNCEMEQNY NMEEHEPKDE EDVDEGENLP  240
PGSYEILQLE KEEILAPHTH FCTICGKGFK RDANLRMHMR GHGDEYKTPA ALAKPHKETG  300
SEPKLIKRYS CPYAGCKRNK DHKKFQPLKT ILCVKNHYKR THCDKSYTCS RCNTKKFSVM  360
ADLKTHEKHC GKDKWLCSCG TTFSRKDKLF GHIALFQGHT PAIPLDDTKG VAEPRDLQSR  420
ENSSMVGSMN FCFGSNPSSE NVVQNIMDAK GNIDDPINYF SSLNFEGCNF GGFNDFSQPP  480
FEDSEGSFSF LMSGSFNCAP KSGGGESSSD NL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	0.0	C2H2 family protein