PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027365525.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 1516aa MW: 168961 Da PI: 7.2239

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027365525.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.4	0.00023	1402	1427	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++C C +sF++k +L+ H r+ + XP_027365525.1 1402 HSCDldGCRMSFKTKAELQLHRRNlC 1427 689999*****************876 PP
2	zf-C2H2	11.6	0.00086	1485	1511	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg sF+ s++ rH r+ H XP_027365525.1 1485 YQCKveGCGLSFRFVSDFSRHRRKtgH 1511 99*********************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 1516 aa Download sequence
MGSVEIPNWL KGLPLAPEFR PTDTEFADPI AYISKIEKEA SNFGICKIIP PLPKPSKKYV 60 FSNLNRSLLK CPDLGPDNSS LVVSNSLKTG FGDGGDDRVL RAVFTTRHQE LGQSPSMKKP 120 KGTVQNPLSS VHRQVWQSGE VYTLEQFESK SKSFARSILG SVKDVSPLVI ESMFWKAALE 180 KPIYVEYAND VPGSAFGETK GHFHCSRRRR RKRIYYKSRI DSSDRKQTEI GSLGDTQTDV 240 TKGASVQSHA DACLQMTKSA TTASTFSSNE GSQSPKEKSS EASNDMQGTA GWKLSNSPWN 300 LQVIARSSGS LTRFMPDDIP GVTSPMVYIG MLFSWFAWHV EDHELHSMNF LHTGSSKTWY 360 AVPGDYAFAF EEVIRSKGYG GNVDHLAALK LLGEKTTLLS PEVIVASGIP CCRLVQNPGE 420 FVVTFPRAYH VGFSHGFNCG EAANFGTPEW LRVAKEAAVR RAAMNYLPML SHQQLLHLLT 480 MSFISRVPRT LLPGVRSSRL KDRQKEEREL LVKQAFIEDM LQENKLLSIL LGKEATKKAV 540 LWNADLLPDS SEDFQFPDLT STTGTSMTDM SNISSAENSS HYLVDEMSLY LENLTDLDLG 600 GDDLPCHFQT DSGALACVGC GILGFPFMTV IQPTEKLIME VLPDDHHLVQ VSSPNTTACV 660 HSSVPRNLSV SELSSAELSD QSLNECNNFW NTSSKFLRPR IFCLEHAVQI VEMLQRKGGA 720 NVLIICHSDY QKIKAHAKAV AEEIHSAFDY DEVPLDTASP ENLTLIDLAI DGEEHDECED 780 WTYKLGINLR YCVHARNNSP SKRVPWTLGT LFYDKYLASD FLSLNWQSRR SRSKRLNCLT 840 QTKPCGSIQR KKDDQLEGRI DGSTAEKKLI QYSRRKFKSK QSCFSVASMG LEFQEKSKNA 900 SALVSRDHYN CASKNELEAK NFRTDCASSC IAASTAMSPM PPVNPIAEVS SSSSLNTSTL 960 QLSNYYPDHI LMIEKGGAEV GNKTVLELDI DTNNDLTPSH SKMHHNTSIS KICGNESEDC 1020 HKKKHSSSLT NATDRNIEWV GKTQITEAII IDSKYNSLCL DGEGNQEYQS ACKSNKEAAL 1080 STALLKQPNL ASMGGSFESP NSNYVAQRIS NPTPLKKTTE EAINCLIERD KEPLIDDKPI 1140 SEHTLNEVCE VQKELNASAD LHNPIMLDAE MQQETHVSAK QQCGFTRGEY TRELNDEVIP 1200 ESVKQCPIQN KNKINEEPVS SYNVAKGKNR SVTTSESGCS EVSVETCPSI QFISDKEKEM 1260 EIHPINRIDE ELCAGSETSL EDSGSEIEKE TCVSGSINGS KVDLSQDSRE LERFELTIAV 1320 PRSNAAKKNK RKVEYPTKNQ LDCDNFIRSP CEGLRPRTGK IAATCKSGGD IDKENQVAKR 1380 ARRSSEVSVP CKNKNDDVRK LHSCDLDGCR MSFKTKAELQ LHRRNLCPHK GCGKKFSSHK 1440 YALLHQRVHD DERPLKCPWK GCSMSFKWAW ARTEHIRVHT GEKPYQCKVE GCGLSFRFVS 1500 DFSRHRRKTG HYVKSA

Sequence ? help Back to Top

Protein Sequence Length: 1516 aa Download sequence

MGSVEIPNWL KGLPLAPEFR PTDTEFADPI AYISKIEKEA SNFGICKIIP PLPKPSKKYV  60
FSNLNRSLLK CPDLGPDNSS LVVSNSLKTG FGDGGDDRVL RAVFTTRHQE LGQSPSMKKP  120
KGTVQNPLSS VHRQVWQSGE VYTLEQFESK SKSFARSILG SVKDVSPLVI ESMFWKAALE  180
KPIYVEYAND VPGSAFGETK GHFHCSRRRR RKRIYYKSRI DSSDRKQTEI GSLGDTQTDV  240
TKGASVQSHA DACLQMTKSA TTASTFSSNE GSQSPKEKSS EASNDMQGTA GWKLSNSPWN  300
LQVIARSSGS LTRFMPDDIP GVTSPMVYIG MLFSWFAWHV EDHELHSMNF LHTGSSKTWY  360
AVPGDYAFAF EEVIRSKGYG GNVDHLAALK LLGEKTTLLS PEVIVASGIP CCRLVQNPGE  420
FVVTFPRAYH VGFSHGFNCG EAANFGTPEW LRVAKEAAVR RAAMNYLPML SHQQLLHLLT  480
MSFISRVPRT LLPGVRSSRL KDRQKEEREL LVKQAFIEDM LQENKLLSIL LGKEATKKAV  540
LWNADLLPDS SEDFQFPDLT STTGTSMTDM SNISSAENSS HYLVDEMSLY LENLTDLDLG  600
GDDLPCHFQT DSGALACVGC GILGFPFMTV IQPTEKLIME VLPDDHHLVQ VSSPNTTACV  660
HSSVPRNLSV SELSSAELSD QSLNECNNFW NTSSKFLRPR IFCLEHAVQI VEMLQRKGGA  720
NVLIICHSDY QKIKAHAKAV AEEIHSAFDY DEVPLDTASP ENLTLIDLAI DGEEHDECED  780
WTYKLGINLR YCVHARNNSP SKRVPWTLGT LFYDKYLASD FLSLNWQSRR SRSKRLNCLT  840
QTKPCGSIQR KKDDQLEGRI DGSTAEKKLI QYSRRKFKSK QSCFSVASMG LEFQEKSKNA  900
SALVSRDHYN CASKNELEAK NFRTDCASSC IAASTAMSPM PPVNPIAEVS SSSSLNTSTL  960
QLSNYYPDHI LMIEKGGAEV GNKTVLELDI DTNNDLTPSH SKMHHNTSIS KICGNESEDC  1020
HKKKHSSSLT NATDRNIEWV GKTQITEAII IDSKYNSLCL DGEGNQEYQS ACKSNKEAAL  1080
STALLKQPNL ASMGGSFESP NSNYVAQRIS NPTPLKKTTE EAINCLIERD KEPLIDDKPI  1140
SEHTLNEVCE VQKELNASAD LHNPIMLDAE MQQETHVSAK QQCGFTRGEY TRELNDEVIP  1200
ESVKQCPIQN KNKINEEPVS SYNVAKGKNR SVTTSESGCS EVSVETCPSI QFISDKEKEM  1260
EIHPINRIDE ELCAGSETSL EDSGSEIEKE TCVSGSINGS KVDLSQDSRE LERFELTIAV  1320
PRSNAAKKNK RKVEYPTKNQ LDCDNFIRSP CEGLRPRTGK IAATCKSGGD IDKENQVAKR  1380
ARRSSEVSVP CKNKNDDVRK LHSCDLDGCR MSFKTKAELQ LHRRNLCPHK GCGKKFSSHK  1440
YALLHQRVHD DERPLKCPWK GCSMSFKWAW ARTEHIRVHT GEKPYQCKVE GCGLSFRFVS  1500
DFSRHRRKTG HYVKSA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	207	213	RRRRRKR
2	830	835	RSRSKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	0.0	C2H2 family protein