PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027365771.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 261aa MW: 30252.1 Da PI: 9.7111

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027365771.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.5	6.4e-18	23	70	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll ++v+++G g+W+++ar g++R +k+c++rw +yl XP_027365771.1 23 KGPWTAEEDRLLNEYVRLHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 70 79********************************************97 PP
2	Myb_DNA-binding	52.7	9.8e-17	76	120	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T++E+ +++++++++G++ W+tIar ++ gRt++++k++w+++ XP_027365771.1 76 RGQITPQEESIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 120 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MYWGGVMSGH MGRGVIEEEV WRKGPWTAEE DRLLNEYVRL HGEGRWNSVA RLAGLKRNGK 60 SCRLRWVNYL RPDLKRGQIT PQEESIILEL HARWGNRWST IARSLPGRTD NEIKNYWRTH 120 FKKKAKSPSD AAEKAKNRLL RKQQFHQQQK QQQLLQQQEA QQQQLQFNFD MKGIMALLED 180 NSHRAPHTSQ ARQEMVNMQQ NTTEEQGYLY SMLNGNTSAT ETLAEEILWD GLWNLDDVHG 240 NFSVASAASK AGLYNLVAPF C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	1e-84	MYB family protein