PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027365976.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 342aa MW: 38318.6 Da PI: 6.2085

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027365976.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92.4	4.5e-29	45	139	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+qe+l+Li+++r+ e+++rrg+ + +p+W++vs+++r++g++r+p+qC+++w+nl+++ykkike+e+ ++es+s +++ ++l+ XP_027365976.1 45 RWTRQEILVLIQGKRDAENKFRRGRtaglafgsgQVEPKWASVSSYCRKHGVNRGPVQCRKRWSNLAGDYKKIKEWESHIREESESFWVMRNDLR 139 8********************97778888888******************************************99999999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGIEEQLSLG QNRNPGEGEA DGKSNGVDGR AEGGDEGGKA PRLPRWTRQE ILVLIQGKRD 60 AENKFRRGRT AGLAFGSGQV EPKWASVSSY CRKHGVNRGP VQCRKRWSNL AGDYKKIKEW 120 ESHIREESES FWVMRNDLRR ERKLPGFFDK EVYDILDSGT ASQLPALALS LSSPNDNKDK 180 DIKDKDSKAE EPHLYDSNRN TAGDDGLFSD FEQEEVGATP DKKDIPIPSP IPISEKQYQP 240 LLRACQGQGV SNEKQPTSNP EMGSTSQGER KRKRLATDGE EETLQYQLID VLERNGKMLS 300 SRLEAQNINF QLDREQRKDH ASNLVAVLDK LADALGRIAD KL

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGIEEQLSLG QNRNPGEGEA DGKSNGVDGR AEGGDEGGKA PRLPRWTRQE ILVLIQGKRD  60
AENKFRRGRT AGLAFGSGQV EPKWASVSSY CRKHGVNRGP VQCRKRWSNL AGDYKKIKEW  120
ESHIREESES FWVMRNDLRR ERKLPGFFDK EVYDILDSGT ASQLPALALS LSSPNDNKDK  180
DIKDKDSKAE EPHLYDSNRN TAGDDGLFSD FEQEEVGATP DKKDIPIPSP IPISEKQYQP  240
LLRACQGQGV SNEKQPTSNP EMGSTSQGER KRKRLATDGE EETLQYQLID VLERNGKMLS  300
SRLEAQNINF QLDREQRKDH ASNLVAVLDK LADALGRIAD KL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-103	Trihelix family protein