PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366116.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 603aa MW: 66515.2 Da PI: 7.2631

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366116.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.7	2.2e-23	119	220	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ +++ + t++ +d +g+ W++++iyr++++r++lt+GW++Fv++++L +gD++vF + + XP_027366116.1 119 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TIIAKDMHGQCWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFL--RAE 209 89**************************986445444..8********************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_027366116.1 210 NGDLCVGIRRA 220 8999**997 PP
2	Auxin_resp	113.2	2.4e-37	273	356	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a+++a ++ +FevvY+Prast+eF+vk + v++a++++++ GmRfkm fetedss++++ +Gt+++v+ +dp+rWp+S+Wr+L+ XP_027366116.1 273 AVTSAVNGRPFEVVYYPRASTPEFCVKSSAVKTAMQIQWCSGMRFKMPFETEDSSRISWfMGTISSVQVSDPIRWPDSPWRLLQ 356 6778999***************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence
MFMVMDSTER GSERCLDSQL WHACAGAMVQ MPPLNTKVFY FPQGHAEHAH GKVDFGQTRV 60 PPLIPCRLSA MRYMADPDTD EVYVKMRLTP LREQELDRED DCFFGNNGVE GQEKPPTSFA 120 KTLTQSDANN GGGFSVPRYC AETIFPRLDY SAEPPVQTII AKDMHGQCWK FRHIYRGTPR 180 RHLLTTGWSN FVNQKKLVAG DSIVFLRAEN GDLCVGIRRA KKGIGGGTEF SSGWNPLFGG 240 GSGFLCGESN LVSGRKGGDE MVGRVAAESV VEAVTSAVNG RPFEVVYYPR ASTPEFCVKS 300 SAVKTAMQIQ WCSGMRFKMP FETEDSSRIS WFMGTISSVQ VSDPIRWPDS PWRLLQVVWD 360 EPDLLQNVKC VNPWLVELVS NMPTFNISPF SPPRKKQRFL QDPYFQVINQ LPVSSFSSNL 420 LNYTNPLCNI QDNNSSAGIQ GARHAQIGLT PSDFPFNKLQ PDMLLGGFSR LDHAAQPIRP 480 PCRTYMSNTT KTNVDITCLL TVGSPGQSFK ESNEVAKAPH ILLFGKLIHT EQKSSNTCSA 540 TTTGNSASEG NSLKTSNASD GLGSALHQSS PIENNSDGGS PWYKDQHKSD LGTENANTLC 600 MAL

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence

MFMVMDSTER GSERCLDSQL WHACAGAMVQ MPPLNTKVFY FPQGHAEHAH GKVDFGQTRV  60
PPLIPCRLSA MRYMADPDTD EVYVKMRLTP LREQELDRED DCFFGNNGVE GQEKPPTSFA  120
KTLTQSDANN GGGFSVPRYC AETIFPRLDY SAEPPVQTII AKDMHGQCWK FRHIYRGTPR  180
RHLLTTGWSN FVNQKKLVAG DSIVFLRAEN GDLCVGIRRA KKGIGGGTEF SSGWNPLFGG  240
GSGFLCGESN LVSGRKGGDE MVGRVAAESV VEAVTSAVNG RPFEVVYYPR ASTPEFCVKS  300
SAVKTAMQIQ WCSGMRFKMP FETEDSSRIS WFMGTISSVQ VSDPIRWPDS PWRLLQVVWD  360
EPDLLQNVKC VNPWLVELVS NMPTFNISPF SPPRKKQRFL QDPYFQVINQ LPVSSFSSNL  420
LNYTNPLCNI QDNNSSAGIQ GARHAQIGLT PSDFPFNKLQ PDMLLGGFSR LDHAAQPIRP  480
PCRTYMSNTT KTNVDITCLL TVGSPGQSFK ESNEVAKAPH ILLFGKLIHT EQKSSNTCSA  540
TTTGNSASEG NSLKTSNASD GLGSALHQSS PIENNSDGGS PWYKDQHKSD LGTENANTLC  600
MAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein